PKBDS0470WCHR
File Set Type
principal analysis
Summary
principal analysis of snATAC-seq data
Description
Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic;T1D autoantibody positive (Aab+);T1D;and T2D donors from the Human Pancreas Analysis Program
Samples
41 items
Sample Terms
Summary
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, male, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, male, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, female, Homo sapiens
PrimaryIslet
islet of Langerhans cell, male, Homo sapiens
Donors
41 items
male
Homo sapiens
female
Homo sapiens
female
Homo sapiens
female
Homo sapiens
male
Homo sapiens
male
Homo sapiens
male
Homo sapiens
male
Homo sapiens
male
Homo sapiens
female
Homo sapiens
MeasurementSet Input File Sets
41 items
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, female, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, male, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, male, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, male, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, female, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, female, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, female, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, male, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, male, Homo sapiens
single-cell ATAC-seq (snATAC-seq)
islet of Langerhans cell, female, Homo sapiens
Files
1 item
Accession
File Format
Content Type
Lab
File Size
Upload Status
h5ad
sparse peak count matrix
Pankbase Consortium, PanKbase
validated
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
