PKBDO1029CZFQ

released

PKBDO1029CZFQ

released
RRID RRID:SAMN19842610Program Donor ID SAMN19842610

Clinical summary

Diabetes status
Type 2 Diabetes
Age (y)
45
Age group
40-64
BMI
28.91
Height (cm)
—
Weight (kg)
—
HbA1c %
7.9
C-Peptide (ng/ml)
0.62
Diabetes duration
20
AAB summary
IAA+
AAB count
1

Demographics

Age (y)
45
Age group
40-64
Pediatric
No
Gender
Female
Genetic Sex
Female
Sex discordant
No
Ethnicity
White
Predicted genetic ancestry
European (71%), African (10%), East-Asian (9%), Admixed-American (6%), South-Asian (4%)
Dominant genetic ancestry
European

Additional clinical

Diabetes (ontology)
T1D stage
Conflicting diabetes evidence
HbA1c-derived diabetes status
Diabetes
Label vs HbA1c discordant
No
Tier 1 complete
Yes
Family history of diabetes
-
Living donor
No
Cause of death
Cerebrovascular/Stroke
Donation type
Donation after brain death
Hospital stay (h)
115
Medication
Metformin,Lantus,Trulicity

Autoantibodies

Summary
IAA+
Any positive
Yes
Tested
Yes
Positive count
1
GADANegative
0 unit/ml
IAAPositive
0.068 unit/ml
1
IA2Negative
0 unit/ml
ZNT8Negative
-0.002 unit/ml

HLA typing

Status: DR3/X

LocusAllele 1Allele 2Method
A325RT-PCR
B851RT-PCR
Bw411RT-PCR
Bw611RT-PCR
C0107RT-PCR
DPB101:0103:01RT-PCR
DQA10105RT-PCR
DQB125RT-PCR
DR117RT-PCR
DR5100RT-PCR
DR52520RT-PCR
DR5300RT-PCR

Data available

Datasets
Genotyping, HLA_typing, RNAseq, scRNAseq, snATACseq, Function, Histology, CODEX, imaging_mass_spec
Tissues
unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset
HLA_typingAccess dataset

Pancreas

imaging_mass_specAccess dataset

Spleen

Lymph

Supplementary

HPAP
Identifiers
PANC-DB:HPAP-081
Pancreas tissue available
Yes
Publication identifiers
PMID:31127054, PMID:36206763
Description
Human pancreas donor SAMN19842610 in the HPAP database
External resources
PANC-DB:HPAP-081

Attribution

HPAP collection
Data Library