released

PKBDO1723DEAS

released

RRID RRID:SAMN19842612Program Donor ID SAMN19842612

Clinical summary

Diabetes status

Type 2 Diabetes

Age (y)

45

Age group

40-64

BMI

35.62

Height (cm)

—

Weight (kg)

—

HbA1c %

5

C-Peptide (ng/ml)

4.35

Diabetes duration

2-3

AAB summary

none positive

AAB count

0

Demographics

Age (y): 45
Age group: 40-64
Pediatric: No
Gender: Male
Genetic Sex: Male
Sex discordant: No
Ethnicity: African American
Predicted genetic ancestry: African (97%), Admixed-American (3%)
Dominant genetic ancestry: African

Additional clinical

Diabetes (ontology): MONDO:0005148
T1D stage: No sufficient information to derive
HbA1c-derived diabetes status: Normal
Label vs HbA1c discordant: Yes
Tier 1 complete: Yes
Family history of diabetes: FALSE
Living donor: No
Cause of death: Anoxia
Donation type: Donation after brain death
Hospital stay (h): 119
Medication: Insulin

Autoantibodies

Summary: none positive
Any positive: No
Tested: Yes
Positive count: 0

GADANegative

0 unit/ml

IAANegative

0 unit/ml

IA2Negative

0 unit/ml

ZNT8Negative

0.002 unit/ml

HLA typing

Status: X/X

Locus	Allele 1	Allele 2	Method
A	23	29	RT-PCR
B	07	45	RT-PCR
Bw4	0	0	RT-PCR
Bw6	1	1	RT-PCR
C	07	16	RT-PCR
DPB1	01:01	17:01	RT-PCR
DQA1	01	05	RT-PCR
DQB1	03:07	05	RT-PCR
DR	01	13	RT-PCR
DR51	0	0	RT-PCR
DR52	52	52	RT-PCR
DR53	0	0	RT-PCR

Data available

Datasets: Genotyping, HLA_typing, RNAseq, scRNAseq, snATACseq, Function, Imaging, Morphology, CyTof, Histology, CODEX, imaging_mass_spec
Tissues: unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset

HLA_typingAccess dataset

Islet

RNAseqAccess dataset

scRNAseqAccess dataset

snATACseqAccess dataset

FunctionAccess dataset

ImagingAccess dataset

MorphologyAccess dataset

CyTofAccess dataset

Pancreas

histologyAccess dataset

CODEXAccess dataset

imaging_mass_specAccess dataset

Spleen

histologyAccess dataset

Lymph

histologyAccess dataset

Supplementary

HPAP

Identifiers

PANC-DB:HPAP-083

Pancreas tissue available: Yes
Other tissues: UBERON:0002048, UBERON:0002107, UBERON:0000948, UBERON:0002113, UBERON:0001264

Publication identifiers

PMID:31127054, PMID:36206763

Description

Human pancreas donor SAMN19842612 in the HPAP database

External resources

PANC-DB:HPAP-083

URL

https://hpap.pmacs.upenn.edu/explore/donor/donor-summary/HPAP-083

Attribution