PKBDO1022AGAE
PKBDO1022AGAE
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
5
Age group
0-12
BMI
16.3
Height (cm)
—
Weight (kg)
—
HbA1c %
6.8
C-Peptide (ng/ml)
1.88
Diabetes duration
—
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 5
- Age group
- 0-12
- Pediatric
- Yes
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (100%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Diabetes
- Label vs HbA1c discordant
- Yes
- Tier 1 complete
- No
- Family history of diabetes
- TRUE
- Family history relationship
- Father
- Living donor
- No
- Cause of death
- Anoxia
- Donation type
- Donation after brain death
- Hospital stay (h)
- 133
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
0.002 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
0.001 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 01:01 | 31:01 | NGS |
| A | 1 | 31 | RT-PCR |
| B | 08:01 | 15:17 | NGS |
| B | 8 | 63 | RT-PCR |
| Bw4 | 1 | 1 | RT-PCR |
| Bw6 | 1 | 1 | RT-PCR |
| C | 07 | — | RT-PCR |
| C | 07:01 | — | NGS |
| DPA1 | 01:03 | 02:02 | NGS |
| DPB1 | 04:01 | 05:01 | NGS |
| DPB1 | 04:01 | 05:01 | RT-PCR |
| DQA1 | 03 | 05 | RT-PCR |
| DQA1 | 03:01 | 05:01 | NGS |
| DQB1 | 02:01 | 03:02 | NGS |
| DQB1 | 2 | 8 | RT-PCR |
| DR | 4 | 17 | RT-PCR |
| DR51 | 0 | 0 | RT-PCR |
| DR52 | 52 | — | RT-PCR |
| DR53 | 0 | 0 | RT-PCR |
| DRB1 | 03:01 | 04:04 | NGS |
| DRB3 | 01:01 | — | NGS |
| DRB4 | — | 01:03 | NGS |
| DRB5 | — | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, scRNAseq, snATACseq, Function, CyTof, Histology, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph, Thymus, Peripheral_blood
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
Pancreas
histologyAccess dataset
imaging_mass_specAccess dataset
Spleen
Lymph
Flow_cytometryAccess dataset
histologyAccess dataset
Thymus
histologyAccess dataset
Peripheral_blood
Flow_cytometryAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-039
- Pancreas tissue available
- Yes
- Other tissues
Publication data
External resources
PANC-DB:HPAP-039
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
