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File Set Type
Taxa
939 items
PKBDS0823AWQO
- klaus-kaestner:HPAP_MeasurementSet_scRNAseq_HPAP-032_no_treatment
experimental data
scRNA-seq
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
ffe812fd-7f27-46a7-a098-4289cef00007
PKBDS6276JJRU
- joyce-niland:SAMN10737781_scRNAseq_assay_untreated
experimental data
scRNA-seq
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
ffc214b6-7594-4ed7-abeb-213afb07724c
PKBDS6113LMCM
- klaus-kaestner:scATAC_isletCells_HPAP-044
experimental data
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
ff84d1c0-4b3c-472b-af65-8b3827f7d01d
PKBDS6293ZIMN
- klaus-kaestner:scRNAseq_IsletCells_HPAP-051
experimental data
scRNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=4
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
ff76f869-ee72-4abd-be9e-e83ae157b890
PKBDS4978GIWI
- klaus-kaestner:scRNAseq_IsletCells_HPAP-054
experimental data
scRNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=4
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
ff277feb-8da2-41b4-b14e-597869f20630
PKBDS6581ITMO
- joyce-niland:SAMN10439569_scRNAseq_assay_untreated
experimental data
scRNA-seq
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fee5cac5-9bef-41c5-bf56-ae68fa5b15e9
PKBDS0559PSWD
- joyce-niland:Prodo_scRNAseq_HP-23135-01__6hr_IL-1b+IFN-g_6hr_IL-1b+IFN-g
intermediate analysis
released
intermediate analysis of scRNA-seq data
Homo sapiens
fecfc0f5-8c8e-4ab3-95d7-e721fb53aa17
PKBDS6660RQXA
- klaus-kaestner:HPAP_MeasurementSet_scRNAseq_HPAP-111_no_treatment
experimental data
scRNA-seq
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fec96f28-be74-44b2-bd1e-d3d791e45fed
PKBDS5349QTDM
- klaus-kaestner:scATAC_isletCells_AnalysisSet_HPAP-085
intermediate analysis
released
intermediate analysis of snATAC-seq data
Homo sapiens
fea404c9-d188-4251-8c91-e97ade73922d
PKBDS5167CEXF
- klaus-kaestner:scATAC_isletCells_HPAP-067
experimental data
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
fe3c196c-564f-44b5-94c1-950336ac7c98
PKBDS7467MJUF
- klaus-kaestner:pancreaticBetaCell_AnalysisSet_RNAseq_HPAP-047
intermediate analysis
released
intermediate analysis of RNA-seq data
Homo sapiens
fdea5bd8-71ba-4ad1-b893-c0cde36788c3
PKBDS7423RRHO
- joyce-niland:Prodo_MeasurementSet_scRNAseq_HP-21077-01__EtOH_EtOH
experimental data
scRNA-seq
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fd09b2e4-eca6-4de4-aaab-37364d0a7503
PKBDS7588NPFJ
- klaus-kaestner:pancreaticExocrineCell_AnalysisSet_RNAseq_HPAP-066
intermediate analysis
released
intermediate analysis of RNA-seq data
Homo sapiens
fcc4ffd7-e422-4892-8a84-6a1f651129aa
PKBDS6074TCZC
- joyce-niland:Prodo_MeasurementSet_scRNAseq_SRR17168076_DMSO
experimental data
scRNA-seq
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fca2b70f-6215-451a-8922-e315ef4267f2
PKBDS3964MMBB
- prodo:Prodo_scRNAseq_HP-21337-01__6hr_IL-1b_6hr_IL-1b
intermediate analysis
released
intermediate analysis of scRNA-seq data
Homo sapiens
fc4d02d7-e2d9-4bd5-b7b0-368ae050f877
PKBDS4712MFGY
- klaus-kaestner:scATAC_isletCells_HPAP-055
experimental data
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
fc0f3fc4-1d84-474b-ab55-c13f999f3681
PKBDS9675WRHO
- klaus-kaestner:HPAP_scRNAseq_HPAP-019_no_treatment
intermediate analysis
released
intermediate analysis of scRNA-seq data
Homo sapiens
fbaa7921-1617-460e-9730-6d4b6399d654
PKBDS0465XZRX
- klaus-kaestner:scATAC_isletCells_AnalysisSet_HPAP-069
intermediate analysis
released
intermediate analysis of snATAC-seq data
Homo sapiens
fb8bb177-bca4-44c2-b7fd-7235cfa5e8be
PKBDS2095DTLM
- klaus-kaestner:pancreaticExocrineCell_MeasurementSet_RNAseq_HPAP-062
experimental data
RNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=6
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
fb699ab0-7f5e-4401-90b4-d87ad2309a60
PKBDS7553VRIH
- joyce-niland:SAMN12022246_scRNAseq_assay_untreated
experimental data
scRNA-seq
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fae9d54a-34eb-43c2-a2ed-9ffa884467cb
PKBDS4380IPSS
- prodo:Prodo_scRNAseq_HP-21337-01__6hr_IL-1b+IFN-g_6hr_IL-1b+IFN-g
intermediate analysis
released
intermediate analysis of scRNA-seq data
Homo sapiens
fadd63f7-86c5-441e-9c59-75c49f16efeb
PKBDS4059JNUH
- joyce-niland:SAMN09929411_scRNAseq_assay_DMSO36hrtreatment
experimental data
scRNA-seq
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fa26dae0-b477-482b-bd82-8158b06535a8
PKBDS1119QJLF
- joyce-niland:IIDP_MeasurementSet_scRNAseq_SRR22775801_no_treatment
experimental data
scRNA-seq
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
fa021b5b-e669-4eae-8c04-c6121a5bc124
PKBDS7052WFAQ
- prodo:HP-21337-01_scRNAseq_assay_IFNg+IL1B+NMMA18hrtreatment
experimental data
scRNA-seq
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
f93a4ac7-03be-4fb5-907a-52bd4b4aaf80
PKBDS6310VVVA
- klaus-kaestner:HPAP_scRNAseq_HPAP-042_no_treatment
intermediate analysis
released
intermediate analysis of scRNA-seq data
Homo sapiens
f907c53d-d4d4-4706-811c-27df51ac0896
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies