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File
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txt
2206
h5ad
1147
bam
817
csv
764
tsv
626
mtx
431
bed
1
fasta
1
gtf
1
Content Type
All
None
QC metrics
2727
sparse gene count matrix
1535
alignments
672
barcode to element mapping
382
element quantifications
290
sequence barcodes
191
transcriptome alignments
145
sparse peak count matrix
42
differential gene expression quantifications
6
contact matrix
1
genes_transcripts
1
genome reference
1
transcriptome reference
1
25 Items
100 Items
300 Items
5994 items
1
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240
AlignmentFile
PKBFI5947MIIA
bam - filtered alignments - GRCh38
Joyce Niland, CoH
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7657TECG
tsv - barcode to element mapping
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI4277VOLY
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2061GCSI
tsv - element quantifications - GRCh38
Klaus Kaestner, UPenn
File Set
intermediate analysis of RNA-seq data
released
validated
AlignmentFile
PKBFI4280YUSM
bam - filtered transcriptome alignments - GENCODE 39
Klaus Kaestner, UPenn
Content Summary
filtered transcriptome alignments
File Set
intermediate analysis of RNA-seq data
released
validated
TabularFile
PKBFI9279XNCC
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI6884NSUP
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI8100OWRD
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI4604NUMN
csv - QC metrics
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7751UVNI
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9821TPGV
txt - QC metrics
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8769YPUJ
csv - QC metrics
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI2134DKYX
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3999YYUM
txt - QC metrics
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5626VPHH
txt - barcode to element mapping
Joyce Niland, CoH
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI8927PZLO
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0192PJCH
mtx - cell by gene sparse gene count matrix
Joyce Niland, CoH
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0558EVNW
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9743AVUJ
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI4160URBL
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8964HOLA
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI2020TGQG
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6305BOOR
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI5302HQOX
bam - filtered transcriptome alignments - GENCODE 39
Klaus Kaestner, UPenn
Content Summary
filtered transcriptome alignments
File Set
intermediate analysis of RNA-seq data
released
validated
MatrixFile
PKBFI4220FBRA
h5ad - gene by cell sparse gene count matrix
Joyce Niland, CoH
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated