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txt
2275
h5ad
1146
bam
817
csv
764
tsv
701
mtx
511
bigWig
12
bed
1
fasta
1
gtf
1
Content Type
All
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QC metrics
2727
sparse gene count matrix
1614
alignments
672
barcode to element mapping
382
element quantifications
350
sequence barcodes
191
transcriptome alignments
145
differential gene expression quantifications
78
sparse peak count matrix
42
signal
12
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AlignmentFile
PKBFI5947MIIA
bam - filtered alignments - GRCh38
Pankbase Consortium, PanKbase
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7657TECG
tsv - barcode to element mapping
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI4277VOLY
mtx - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2061GCSI
tsv - element quantifications - GRCh38
Pankbase Consortium, PanKbase
File Set
intermediate analysis of RNA-seq data
released
validated
AlignmentFile
PKBFI4280YUSM
bam - filtered transcriptome alignments - GENCODE 39
Pankbase Consortium, PanKbase
Content Summary
filtered transcriptome alignments
File Set
intermediate analysis of RNA-seq data
released
validated
TabularFile
PKBFI9279XNCC
tsv - barcode to element mapping
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3388CAXM
tsv - differential gene expression quantifications
Pankbase Consortium, PanKbase
File Set
principal analysis of data
released
validated
MatrixFile
PKBFI6884NSUP
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI8100OWRD
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI4604NUMN
csv - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7751UVNI
mtx - cell by gene sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9821TPGV
txt - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8769YPUJ
csv - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI2134DKYX
bam - filtered alignments - GRCh38
Pankbase Consortium, PanKbase
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3999YYUM
txt - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5626VPHH
txt - barcode to element mapping
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI8927PZLO
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0192PJCH
mtx - cell by gene sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0558EVNW
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9743AVUJ
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI4160URBL
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8964HOLA
txt - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI2020TGQG
h5ad - gene by cell sparse gene count matrix
Pankbase Consortium, PanKbase
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6305BOOR
csv - QC metrics
Pankbase Consortium, PanKbase
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI5302HQOX
bam - filtered transcriptome alignments - GENCODE 39
Pankbase Consortium, PanKbase
Content Summary
filtered transcriptome alignments
File Set
intermediate analysis of RNA-seq data
released
validated