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txt
2275
h5ad
1146
bam
817
csv
764
tsv
701
mtx
511
bigWig
12
bed
1
fasta
1
gtf
1
Content Type
All
None
QC metrics
2727
sparse gene count matrix
1614
alignments
672
barcode to element mapping
382
element quantifications
350
sequence barcodes
191
transcriptome alignments
145
differential gene expression quantifications
78
sparse peak count matrix
42
signal
12
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Reference Files
Status
Transcriptome Annotation
Upload Status
/alignment-files/PKBFI5947MIIA/
PKBFI5947MIIA
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS9867LLDH/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI7657TECG/
PKBFI7657TECG
barcode to element mapping
tsv
/analysis-sets/PKBDS6543THTF/
released
validated
/matrix-files/PKBFI4277VOLY/
PKBFI4277VOLY
gene by cell sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS2848ZCYL/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI2061GCSI/
PKBFI2061GCSI
GRCh38
element quantifications
tsv
/analysis-sets/PKBDS5408EAEI/
released
validated
/alignment-files/PKBFI4280YUSM/
PKBFI4280YUSM
GENCODE 39
filtered transcriptome alignments
transcriptome alignments
bam
/analysis-sets/PKBDS4203KSNH/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI9279XNCC/
PKBFI9279XNCC
barcode to element mapping
tsv
/analysis-sets/PKBDS6939NVNR/
released
validated
/tabular-files/PKBFI3388CAXM/
PKBFI3388CAXM
differential gene expression quantifications
tsv
/analysis-sets/PKBDS6961LIXT/
released
validated
/matrix-files/PKBFI6884NSUP/
PKBFI6884NSUP
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS1578ODWO/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI8100OWRD/
PKBFI8100OWRD
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5522YXVV/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI4604NUMN/
PKBFI4604NUMN
QC metrics
csv
/analysis-sets/PKBDS3380PKTA/
released
validated
/matrix-files/PKBFI7751UVNI/
PKBFI7751UVNI
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS5847QGPP/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI9821TPGV/
PKBFI9821TPGV
QC metrics
txt
/analysis-sets/PKBDS6939TCMH/
released
validated
/tabular-files/PKBFI8769YPUJ/
PKBFI8769YPUJ
QC metrics
csv
/analysis-sets/PKBDS4530RFYP/
released
validated
/alignment-files/PKBFI2134DKYX/
PKBFI2134DKYX
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS7481RHDC/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI3999YYUM/
PKBFI3999YYUM
QC metrics
txt
/analysis-sets/PKBDS3609OQGX/
released
validated
/tabular-files/PKBFI5626VPHH/
PKBFI5626VPHH
barcode to element mapping
txt
/analysis-sets/PKBDS8950FUII/
released
validated
/matrix-files/PKBFI8927PZLO/
PKBFI8927PZLO
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS7851KFDU/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI0192PJCH/
PKBFI0192PJCH
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS3609OQGX/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI0558EVNW/
PKBFI0558EVNW
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI9743AVUJ/
PKBFI9743AVUJ
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0985GXTS/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI4160URBL/
PKBFI4160URBL
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5997XWUW/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI8964HOLA/
PKBFI8964HOLA
QC metrics
txt
/analysis-sets/PKBDS0799JFGO/
released
validated
/matrix-files/PKBFI2020TGQG/
PKBFI2020TGQG
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS2129JPJP/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI6305BOOR/
PKBFI6305BOOR
QC metrics
csv
/analysis-sets/PKBDS7216MXEZ/
released
validated
/alignment-files/PKBFI5302HQOX/
PKBFI5302HQOX
GENCODE 39
filtered transcriptome alignments
transcriptome alignments
bam
/analysis-sets/PKBDS7218UPUB/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated