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txt
3391
bam
2479
tsv
2381
h5ad
1146
csv
764
mtx
523
bed
13
bigWig
13
fasta
1
gtf
1
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QC metrics
4400
alignments
1782
sparse gene count matrix
1626
element quantifications
1460
transcriptome alignments
697
barcode to element mapping
382
sequence barcodes
191
differential gene expression quantifications
90
sparse peak count matrix
42
peaks
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Reference Files
Status
Transcriptome Annotation
Upload Status
/alignment-files/PKBFI2350HVFC/
PKBFI2350HVFC
GENCODE 39
transcriptome alignments
bam
/analysis-sets/PKBDS3079NZNK/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI5199FJNF/
PKBFI5199FJNF
GRCh38
QC metrics
txt
/analysis-sets/PKBDS8240DOTA/
released
validated
/alignment-files/PKBFI3064AUYB/
PKBFI3064AUYB
GENCODE 39
transcriptome alignments
bam
/analysis-sets/PKBDS1007CQKS/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/alignment-files/PKBFI5947MIIA/
PKBFI5947MIIA
GRCh38
alignments
bam
/analysis-sets/PKBDS9867LLDH/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI7657TECG/
PKBFI7657TECG
barcode to element mapping
tsv
/analysis-sets/PKBDS6543THTF/
released
validated
/matrix-files/PKBFI4277VOLY/
PKBFI4277VOLY
sparse gene count matrix
mtx
/analysis-sets/PKBDS2848ZCYL/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI2061GCSI/
PKBFI2061GCSI
GRCh38
element quantifications
tsv
/analysis-sets/PKBDS5408EAEI/
released
validated
/alignment-files/PKBFI4280YUSM/
PKBFI4280YUSM
GENCODE 39
transcriptome alignments
bam
/analysis-sets/PKBDS4203KSNH/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI9279XNCC/
PKBFI9279XNCC
barcode to element mapping
tsv
/analysis-sets/PKBDS6939NVNR/
released
validated
/tabular-files/PKBFI3388CAXM/
PKBFI3388CAXM
differential gene expression quantifications
tsv
/analysis-sets/PKBDS6961LIXT/
released
validated
/matrix-files/PKBFI6884NSUP/
PKBFI6884NSUP
sparse gene count matrix
h5ad
/analysis-sets/PKBDS1578ODWO/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/alignment-files/PKBFI6317NLYS/
PKBFI6317NLYS
GRCh38
alignments
bam
/analysis-sets/PKBDS5928UOGG/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/matrix-files/PKBFI8100OWRD/
PKBFI8100OWRD
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5522YXVV/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI2039XCTY/
PKBFI2039XCTY
GRCh38
QC metrics
tsv
/analysis-sets/PKBDS6263SKMX/
released
validated
/tabular-files/PKBFI4604NUMN/
PKBFI4604NUMN
QC metrics
csv
/analysis-sets/PKBDS3380PKTA/
released
validated
/matrix-files/PKBFI7751UVNI/
PKBFI7751UVNI
sparse gene count matrix
mtx
/analysis-sets/PKBDS5847QGPP/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI8014KHVT/
PKBFI8014KHVT
GRCh38
element quantifications
tsv
/analysis-sets/PKBDS2830MRJL/
released
validated
/tabular-files/PKBFI5623WOWB/
PKBFI5623WOWB
GRCh38
QC metrics
tsv
/analysis-sets/PKBDS1007CQKS/
released
validated
/tabular-files/PKBFI9821TPGV/
PKBFI9821TPGV
QC metrics
txt
/analysis-sets/PKBDS6939TCMH/
released
validated
/tabular-files/PKBFI4488YJOL/
PKBFI4488YJOL
GRCh38
QC metrics
txt
/analysis-sets/PKBDS8826YHZX/
released
validated
/tabular-files/PKBFI8769YPUJ/
PKBFI8769YPUJ
QC metrics
csv
/analysis-sets/PKBDS4530RFYP/
released
validated
/tabular-files/PKBFI6108CZJI/
PKBFI6108CZJI
GRCh38
element quantifications
tsv
/analysis-sets/PKBDS7473PEQV/
released
validated
/alignment-files/PKBFI2134DKYX/
PKBFI2134DKYX
GRCh38
alignments
bam
/analysis-sets/PKBDS7481RHDC/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
/tabular-files/PKBFI5193SYLB/
PKBFI5193SYLB
GRCh38
QC metrics
txt
/analysis-sets/PKBDS3886BWFH/
released
validated
/tabular-files/PKBFI3999YYUM/
PKBFI3999YYUM
QC metrics
txt
/analysis-sets/PKBDS3609OQGX/
released
validated