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MeasurementSet
Sample
Assay
Library
Provenance
Quality
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Taxa
All
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Homo sapiens
627
Sample Term
All
None
islet of Langerhans
415
pancreatic A cell
56
EndoC-βH1
53
exocrine cell
45
type B pancreatic cell
44
EndoC-bH3
7
EndoC-bH2
5
EndoC-bH5
2
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ID
Accession
Alternate Accessions
Assay Targeted Genes
Assay Term
Donors
File Set Type
Library Construction Platform
Preferred Assay Title
Protocols
Samples
Sequencing Library Types
Status
Summary
Taxa
/measurement-sets/PKBDS0823AWQO/
PKBDS0823AWQO
/assay-terms/OBI_0002631/
/human-donors/PKBDO4069UFSJ/
experimental data
scRNA-seq
/primary-islet/PKBSM4984ZBLV/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS6276JJRU/
PKBDS6276JJRU
/assay-terms/OBI_0002631/
/human-donors/PKBDO0189DPPC/
experimental data
scRNA-seq
/primary-islet/PKBSM1887MBQF/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS6113LMCM/
PKBDS6113LMCM
/assay-terms/OBI_0002764/
/human-donors/PKBDO5844FAXW/
experimental data
/platform-terms/EFO_0008563/
,
/platform-terms/EFO_0008637/
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
/primary-islet/PKBSM5730EGRX/
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
/measurement-sets/PKBDS6293ZIMN/
PKBDS6293ZIMN
/assay-terms/OBI_0002631/
/human-donors/PKBDO1015YEQK/
experimental data
/platform-terms/EFO_0008637/
scRNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=4
/primary-islet/PKBSM4043YPPC/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS4978GIWI/
PKBDS4978GIWI
/assay-terms/OBI_0002631/
/human-donors/PKBDO2480WRMR/
experimental data
/platform-terms/EFO_0008637/
scRNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=4
/primary-islet/PKBSM0525CBWM/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS6581ITMO/
PKBDS6581ITMO
/assay-terms/OBI_0002631/
/human-donors/PKBDO5301GZBH/
experimental data
scRNA-seq
/primary-islet/PKBSM3825FNRZ/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS6660RQXA/
PKBDS6660RQXA
/assay-terms/OBI_0002631/
/human-donors/PKBDO0755OVBR/
experimental data
scRNA-seq
/primary-islet/PKBSM8339ZAIT/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS5167CEXF/
PKBDS5167CEXF
/assay-terms/OBI_0002764/
/human-donors/PKBDO1799FAHR/
experimental data
/platform-terms/EFO_0008637/
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
/primary-islet/PKBSM2945ZOKM/
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
/measurement-sets/PKBDS7423RRHO/
PKBDS7423RRHO
/assay-terms/OBI_0002631/
/human-donors/PKBDO9217YCLV/
experimental data
scRNA-seq
/primary-islet/PKBSM6394EOTZ/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS0310UCQN/
PKBDS0310UCQN
/assay-terms/OBI_0003090/
/human-donors/PKBDO8293TLPA/
experimental data
RNA-seq
/human-beta-cell-line/PKBSM9768JJCM/
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
/measurement-sets/PKBDS6074TCZC/
PKBDS6074TCZC
/assay-terms/OBI_0002631/
/human-donors/PKBDO9152GWOH/
experimental data
scRNA-seq
/primary-islet/PKBSM6362EVWN/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS4712MFGY/
PKBDS4712MFGY
/assay-terms/OBI_0002764/
/human-donors/PKBDO1384BFXE/
experimental data
/platform-terms/EFO_0008637/
snATAC-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=5
/primary-islet/PKBSM3422VIKK/
accessible DNA
released
single-cell ATAC-seq (snATAC-seq)
Homo sapiens
/measurement-sets/PKBDS2095DTLM/
PKBDS2095DTLM
/assay-terms/OBI_0003090/
/human-donors/PKBDO0742JZZH/
experimental data
/platform-terms/EFO_0008637/
RNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=6
/primary-cells/PKBSM5345IWBE/
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
/measurement-sets/PKBDS7553VRIH/
PKBDS7553VRIH
/assay-terms/OBI_0002631/
/human-donors/PKBDO2444UOCY/
experimental data
scRNA-seq
/primary-islet/PKBSM1414OXUT/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS4059JNUH/
PKBDS4059JNUH
/assay-terms/OBI_0002631/
/human-donors/PKBDO5437DFNE/
experimental data
scRNA-seq
/primary-islet/PKBSM9873CKZT/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS1119QJLF/
PKBDS1119QJLF
/assay-terms/OBI_0002631/
/human-donors/PKBDO5023FAXA/
experimental data
scRNA-seq
/primary-islet/PKBSM3033ZIKJ/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS7052WFAQ/
PKBDS7052WFAQ
/assay-terms/OBI_0002631/
/human-donors/PKBDO9542NWXT/
experimental data
scRNA-seq
/primary-islet/PKBSM7643EJYF/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS5836PRQQ/
PKBDS5836PRQQ
/assay-terms/OBI_0003090/
/human-donors/PKBDO8293TLPA/
experimental data
RNA-seq
/human-beta-cell-line/PKBSM8066JBYH/
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
/measurement-sets/PKBDS2706XIGG/
PKBDS2706XIGG
/assay-terms/OBI_0002631/
/human-donors/PKBDO2338WVRY/
experimental data
/platform-terms/EFO_0008563/
scRNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=4
/primary-islet/PKBSM4633DYOY/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS4167OESX/
PKBDS4167OESX
/assay-terms/OBI_0002631/
/human-donors/PKBDO8296VZNP/
experimental data
scRNA-seq
/primary-islet/PKBSM1642WJOW/
polyA enriched
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS0814YODS/
PKBDS0814YODS
/assay-terms/OBI_0003090/
/human-donors/PKBDO9071FTMO/
experimental data
RNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=6
/primary-cells/PKBSM8898VHXI/
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
/measurement-sets/PKBDS3272HFKW/
PKBDS3272HFKW
/assay-terms/OBI_0003090/
/human-donors/PKBDO5965CWYG/
experimental data
RNA-seq
https://hpap.pmacs.upenn.edu/explore/workflow/islet-molecular-phenotyping-studies?protocol=6
/primary-cells/PKBSM8515DTTV/
rRNA depleted
released
bulk RNA-seq assay (RNA-seq)
Homo sapiens
/measurement-sets/PKBDS3227VCCX/
PKBDS3227VCCX
/assay-terms/OBI_0002631/
/human-donors/PKBDO6323HZHM/
experimental data
scRNA-seq
/primary-islet/PKBSM8482JHCM/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS0981BALH/
PKBDS0981BALH
/assay-terms/OBI_0002631/
/human-donors/PKBDO2080FGND/
experimental data
scRNA-seq
/primary-islet/PKBSM8868ZXBQ/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens
/measurement-sets/PKBDS2751RUQW/
PKBDS2751RUQW
/assay-terms/OBI_0002631/
/human-donors/PKBDO9686EPMZ/
experimental data
scRNA-seq
/primary-islet/PKBSM3821POQF/
released
single-cell RNA sequencing assay (scRNA-seq)
Homo sapiens