samtofastq

released

Title

SamToFastq

Description

Converts a SAM or BAM file to FASTQ. This tool extracts read sequences and base quality scores from the input SAM/BAM file and outputs them in FASTQ format. This can be used by way of a pipe to run BWA MEM on unmapped BAM (uBAM) files efficiently.

Source URL

http://broadinstitute.github.io/picard/command-line-overview.html#SamToFastq

Aliases

kyle-gaulton:software_SamToFastq

Software Versions

1 item

Page

Version

Download

samtofastq-v3.3.0

v3.3.0

https://github.com/broadinstitute/picard/archive/refs/tags/3.3.0.tar.gz

samtofastq

Software Versions

Attribution