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File
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File Format
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txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS7507FPVN/
25 Items
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300 Items
25 items
TabularFile
PKBFI4138RJFV
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI6017XCCL
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI2117KZKD
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI6036OAIF
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5467OSZB
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6402XCGA
csv - sequence barcodes
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7913WVWM
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3146XOCY
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0945GBNU
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI9489BSLF
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7598NOEG
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI3614NCXL
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9733MOSC
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7939RDXQ
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0730WZXI
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0349ZUGD
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0790MBJE
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7042UIYF
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7547MIKT
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI3291ZSLJ
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI3779OCQL
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5637ZCEB
txt - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI3512KJSY
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI8534PLJP
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1283WDKH
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated