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File
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File Format
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txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS6995HXCY/
25 Items
100 Items
300 Items
25 items
TabularFile
PKBFI1957EXQX
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9356HJOC
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7325CDLW
txt - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI9420FJTE
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6230BKKH
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI5703HURX
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2809VUFM
csv - sequence barcodes
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3867NMSQ
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6654MVJI
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3785DWUD
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9491CQNP
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI2269ASDL
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5674FHMI
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI5810NALQ
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9301GNFH
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI4777IOXS
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0546METO
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1010IMFD
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3769IVWD
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9019RMTG
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0296GHYI
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7094BOZP
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1394WVKQ
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI4592ILPU
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7608HOJK
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated