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File Format
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txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS4331AFFJ/
25 Items
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300 Items
25 items
MatrixFile
PKBFI3456NUPK
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7669LHOA
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3075WVNR
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7460TKRJ
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0809BCDX
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI9466KGTG
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5527OVNS
csv - sequence barcodes
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8415OXJV
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI2981SJMQ
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0301QQBF
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8029AWYP
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI5766QBAE
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI1454JOBI
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0237IQYX
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI1158DEFJ
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6600EPFB
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3260XZOO
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI3145TRLM
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1105YKVA
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5901EPBQ
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI1009YZHQ
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0857QWME
txt - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI5938QCKU
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6315MEBT
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6713KSWS
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated