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File
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File Format
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txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS4288UNGF/
25 Items
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300 Items
25 items
AlignmentFile
PKBFI5242NJSN
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8330RZOJ
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI6842AVNV
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9658JHFK
txt - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7493JMBH
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9227KNDU
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0399OHFO
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6869KBRJ
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9661VTNI
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2667FULD
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7951AJDY
csv - sequence barcodes
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3441RUVG
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7723GRFN
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3622WWGK
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2795VIPT
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI1587JCVQ
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI1308KGXS
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI3458VPCX
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1319NCLK
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0447DWYP
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI0290LNNE
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7958FFZJ
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5523ITGS
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9064JZQQ
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI5945GQWL
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated