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File Format
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txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS2803APLR/
25 Items
100 Items
300 Items
25 items
MatrixFile
PKBFI9571LAPF
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7402ORQK
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5101CVSB
tsv - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI4025ZQBP
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2981QZSF
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9575MQUJ
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI6932NJAG
mtx - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI0429PYKF
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1096SKDI
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI7440ILZN
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI9418OAEV
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6308PZCP
csv - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI0859EWJE
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI1342EOUN
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI5099PTOI
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
AlignmentFile
PKBFI7770ZTLO
bam - filtered alignments - GRCh38
Klaus Kaestner, UPenn
Content Summary
filtered alignments
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI2526VSVK
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7638MTVC
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI2667FVLD
mtx - cell by gene sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
cell by gene sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI9737TLTM
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI8692QBGY
txt - barcode to element mapping
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
MatrixFile
PKBFI7934QFCG
h5ad - gene by cell sparse gene count matrix
Klaus Kaestner, UPenn
Content Summary
gene by cell sparse gene count matrix
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI6669VROC
csv - sequence barcodes
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2180SPOP
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated
TabularFile
PKBFI2600WXDE
txt - QC metrics
Klaus Kaestner, UPenn
File Set
intermediate analysis of scRNA-seq data
released
validated