Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
File
Format
Provenance
Quality
Clear All
Click and hold a term momentarily to select items
without
that term.
File Format
All
None
txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS5899XLLP/
25 Items
100 Items
300 Items
25 items
ID
Accession
Alternate Accessions
Assembly
Content Summary
Content Type
File Format
File Set
Lab
Reference Files
Status
Transcriptome Annotation
Upload Status
UUID
/matrix-files/PKBFI0558EVNW/
PKBFI0558EVNW
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
ff316ebb-c093-4395-8d3f-d12e2c0681fe
/tabular-files/PKBFI8622HYFD/
PKBFI8622HYFD
QC metrics
csv
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
ca5da70e-4941-439e-81eb-6af96d5c5157
/tabular-files/PKBFI7415JNCF/
PKBFI7415JNCF
barcode to element mapping
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
c93acbb8-b519-4517-bc0e-fa43b6370f30
/tabular-files/PKBFI7070GSLD/
PKBFI7070GSLD
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
c7592f15-19d2-49aa-9235-deaad75df22a
/matrix-files/PKBFI7544DYZA/
PKBFI7544DYZA
gene by cell sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
c1346f72-6691-420e-b560-8ee79af66ecc
/tabular-files/PKBFI6752MNCA/
PKBFI6752MNCA
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
ba37f52d-7d0a-416b-9d4e-236b96325ba5
/matrix-files/PKBFI3757ZGWF/
PKBFI3757ZGWF
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
b86a0335-13af-4f19-937d-926950134645
/matrix-files/PKBFI4474DBLX/
PKBFI4474DBLX
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
aecda428-aa99-4520-90bf-e8dbf983449d
/tabular-files/PKBFI2832TKTK/
PKBFI2832TKTK
sequence barcodes
csv
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
800f21c1-8310-4650-b210-68c06cdeb1e6
/tabular-files/PKBFI8362VATJ/
PKBFI8362VATJ
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
7d152c74-025f-4b25-a7df-35d0cb67529c
/tabular-files/PKBFI6769KVTI/
PKBFI6769KVTI
QC metrics
csv
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
5c5e7517-a830-43ab-8f70-4345e37a5c91
/alignment-files/PKBFI2440KSHP/
PKBFI2440KSHP
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
479674e6-b180-4b2c-8fd1-3a4d5e826356
/matrix-files/PKBFI2799RROO/
PKBFI2799RROO
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
42562bfb-dff1-459f-9a43-38a83396ab69
/matrix-files/PKBFI0349EOOF/
PKBFI0349EOOF
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
41668cbd-fe7d-4010-a822-540272730eab
/tabular-files/PKBFI4160LGOZ/
PKBFI4160LGOZ
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
40dea40e-4b6f-488a-830f-c4b50ae7dac6
/tabular-files/PKBFI9618BMOD/
PKBFI9618BMOD
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
3cd95d1c-9c35-4308-a174-d14fc61ec3be
/alignment-files/PKBFI3519CASG/
PKBFI3519CASG
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
3296484e-e45e-4361-a892-28940d65af26
/matrix-files/PKBFI9226KKCW/
PKBFI9226KKCW
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
2d5cf26b-865c-4958-87a9-afe4af1672dc
/tabular-files/PKBFI1249GNHX/
PKBFI1249GNHX
barcode to element mapping
tsv
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
234949ba-3255-42fb-9b90-af76bd6a5b2d
/tabular-files/PKBFI5496IQGJ/
PKBFI5496IQGJ
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
228815c9-daee-4d72-aa3d-b69d2ac91cc1
/tabular-files/PKBFI6378CECN/
PKBFI6378CECN
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
20dcfb53-b173-46eb-916e-4cf6f5ca0dda
/tabular-files/PKBFI0422RUUQ/
PKBFI0422RUUQ
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
1e6c9f74-209a-45f9-8a2c-cc39b228e3b2
/matrix-files/PKBFI3419UUTA/
PKBFI3419UUTA
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
1cc11882-7d17-46f0-86ea-21c685e9fe77
/tabular-files/PKBFI9365MFLL/
PKBFI9365MFLL
QC metrics
csv
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
0c7aec15-bf6e-439c-bcbd-f3d95d379678
/tabular-files/PKBFI7355KLUL/
PKBFI7355KLUL
QC metrics
txt
/analysis-sets/PKBDS5899XLLP/
/labs/joyce-niland/
released
validated
03040a63-aab7-4eb0-8613-ba1f48f0947d