Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
File
Format
Provenance
Quality
Clear All
Click and hold a term momentarily to select items
without
that term.
File Format
All
None
txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS4641KXTK/
25 Items
100 Items
300 Items
25 items
ID
Accession
Alternate Accessions
Assembly
Content Summary
Content Type
File Format
File Set
Lab
Reference Files
Status
Transcriptome Annotation
Upload Status
UUID
/tabular-files/PKBFI3360NMXA/
PKBFI3360NMXA
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
fe2fdf3b-4941-4d51-846d-fd974dc7bc8c
/tabular-files/PKBFI5836MHEP/
PKBFI5836MHEP
QC metrics
csv
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
fb176ead-8215-4190-9512-93ac91f0aa27
/tabular-files/PKBFI0613VMDT/
PKBFI0613VMDT
barcode to element mapping
tsv
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
dbe89414-b43e-45ea-99d5-3036360a6b38
/alignment-files/PKBFI4780HRAA/
PKBFI4780HRAA
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
ca61ade4-655c-4e14-8e99-fd56aa06e31a
/tabular-files/PKBFI2683NIQR/
PKBFI2683NIQR
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
a38a6074-a485-4290-b051-a3b87043c3e8
/matrix-files/PKBFI6439MLCA/
PKBFI6439MLCA
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
a1a6478e-c19e-457f-8f9d-e829c9b686ea
/matrix-files/PKBFI8536APTY/
PKBFI8536APTY
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
8d10ac2c-f06a-4919-af8c-44a6279f0073
/tabular-files/PKBFI3885YSXL/
PKBFI3885YSXL
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
8cf0146f-0666-4296-b956-8ddde2ff08d2
/matrix-files/PKBFI9374RIXO/
PKBFI9374RIXO
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
89df454a-9f19-4114-90de-91469a84f9c1
/tabular-files/PKBFI2206XCUI/
PKBFI2206XCUI
barcode to element mapping
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
881a95d3-782e-4b14-b7c3-2041de191b14
/tabular-files/PKBFI7360AWDK/
PKBFI7360AWDK
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
7560bb72-2374-4a0f-b670-f9ae510a6f4d
/tabular-files/PKBFI1540KFUX/
PKBFI1540KFUX
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
740d39eb-f3a5-41d5-85c5-28df7a7ef02b
/matrix-files/PKBFI3966YZXS/
PKBFI3966YZXS
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
5e0d4b21-7af4-4a85-855a-21158a10823c
/alignment-files/PKBFI6310OVXD/
PKBFI6310OVXD
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
590fec65-3a06-4ffa-83d1-8c194630fceb
/matrix-files/PKBFI5913AZBP/
PKBFI5913AZBP
gene by cell sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
4a493e67-92d7-468f-bd18-0e0504a9fa34
/tabular-files/PKBFI7155DWBQ/
PKBFI7155DWBQ
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
47a49b1f-603d-4ee9-b373-13b257aa3dee
/tabular-files/PKBFI5040IXYD/
PKBFI5040IXYD
sequence barcodes
csv
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
38db8a20-4b2b-41c5-a75a-ae5c2e688104
/tabular-files/PKBFI4663TMMI/
PKBFI4663TMMI
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
20f040c2-811c-40b3-92e7-212c7cd0380c
/tabular-files/PKBFI1251BEZU/
PKBFI1251BEZU
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
1b094ec9-68fe-48ad-8dd4-cede85cd1d96
/tabular-files/PKBFI0268DUBR/
PKBFI0268DUBR
QC metrics
txt
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
16164ad9-6512-4ebf-b95f-69bf939a123c
/matrix-files/PKBFI1117WNWZ/
PKBFI1117WNWZ
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
10b86408-42d4-4541-816d-0589fa8aa059
/matrix-files/PKBFI9172SZUP/
PKBFI9172SZUP
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
0b6eb503-0649-4866-aae1-dc5448a56250
/tabular-files/PKBFI6948QHCZ/
PKBFI6948QHCZ
QC metrics
csv
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
03a7482c-b0d3-46a0-b32b-0d5a08d6a450
/tabular-files/PKBFI5352ZYER/
PKBFI5352ZYER
QC metrics
csv
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
released
validated
0221a41f-0d5f-4cd6-9c10-9f9f156b2a66
/matrix-files/PKBFI4707UQIV/
PKBFI4707UQIV
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4641KXTK/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
00f6bcf6-c4a9-4806-8bbc-793525d75899