Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
File
Format
Provenance
Quality
Clear All
Click and hold a term momentarily to select items
without
that term.
File Format
All
None
txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS4128TVDA/
25 Items
100 Items
300 Items
25 items
ID
Accession
Alternate Accessions
Assembly
Content Summary
Content Type
File Format
File Set
Lab
Reference Files
Status
Transcriptome Annotation
Upload Status
UUID
/tabular-files/PKBFI0920CRMK/
PKBFI0920CRMK
barcode to element mapping
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
e45011c3-83d7-4a9b-ba76-e3559c2351a6
/matrix-files/PKBFI8411NSME/
PKBFI8411NSME
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
e2130e62-77ec-499b-a470-a8b6bc995c13
/tabular-files/PKBFI6586WDAM/
PKBFI6586WDAM
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
e12063b6-7948-4e05-af30-73ff86e70c62
/matrix-files/PKBFI7453RILM/
PKBFI7453RILM
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
d83a1718-4e5c-420f-97a4-4daff1b237a2
/matrix-files/PKBFI4449OELB/
PKBFI4449OELB
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
af3deeb2-0e2d-45c4-bae3-33348ea778b1
/tabular-files/PKBFI2865TPKN/
PKBFI2865TPKN
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
927daa33-699b-4d05-bb1b-c0f35a9c1ccd
/tabular-files/PKBFI4332SSWP/
PKBFI4332SSWP
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
913dc12c-cb78-43ff-b4c0-07944864b72b
/matrix-files/PKBFI2555KIUG/
PKBFI2555KIUG
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
90a9d4b8-79f2-4dbc-9bc4-69192e9cfb6a
/alignment-files/PKBFI9245TDKO/
PKBFI9245TDKO
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
825d22e3-b3ac-4ddf-978e-269b3216a8f9
/tabular-files/PKBFI2396ZXDQ/
PKBFI2396ZXDQ
QC metrics
csv
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
80cd5378-23dd-4d44-af61-763324e6a40a
/alignment-files/PKBFI2369EBBK/
PKBFI2369EBBK
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
761d255d-3045-4b5f-a937-a2702fc20d6f
/tabular-files/PKBFI1913EJCZ/
PKBFI1913EJCZ
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
6babbae0-e58c-414a-b4df-8908154ef0bc
/matrix-files/PKBFI9071WATR/
PKBFI9071WATR
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
674ffa54-9c28-4cd0-a6cb-8dda280f5aec
/tabular-files/PKBFI5578SCFD/
PKBFI5578SCFD
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
63c4c339-af0a-48c8-9a8a-f4e32f0a7e99
/tabular-files/PKBFI3836UMNU/
PKBFI3836UMNU
sequence barcodes
csv
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
63a9229d-b5f1-400f-801e-c6b17de91527
/matrix-files/PKBFI0416OJKS/
PKBFI0416OJKS
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
62d24b7b-6b50-41cf-a0db-9b06125481ab
/tabular-files/PKBFI0781AXWU/
PKBFI0781AXWU
QC metrics
csv
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
536ea61f-96df-4017-931b-a282d131a5be
/tabular-files/PKBFI4410IATA/
PKBFI4410IATA
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
4838d1ac-56fa-4455-ac11-ffcb995e772e
/matrix-files/PKBFI2486VCXX/
PKBFI2486VCXX
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
424accfc-3087-4d84-b38e-c481a40d0795
/tabular-files/PKBFI4311UAGN/
PKBFI4311UAGN
QC metrics
csv
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
33de7ed6-23af-4d57-b07b-3ece667e34ff
/tabular-files/PKBFI1847BBTY/
PKBFI1847BBTY
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
2f39e04d-7f6a-4980-9b47-a6eefc9d9706
/tabular-files/PKBFI3737GADT/
PKBFI3737GADT
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
2dd169c2-defe-46c7-85b9-94586b32f807
/tabular-files/PKBFI7733UMTP/
PKBFI7733UMTP
QC metrics
txt
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
2cdfebcc-376a-413f-81ec-b63604d513c3
/matrix-files/PKBFI7268MJNN/
PKBFI7268MJNN
gene by cell sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
26aed416-a495-4991-8884-52c780f0ac21
/tabular-files/PKBFI1987TZHQ/
PKBFI1987TZHQ
barcode to element mapping
tsv
/analysis-sets/PKBDS4128TVDA/
/labs/joyce-niland/
released
validated
0bf9b0e0-dd12-42ca-88d8-824a7840e833