Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
File
Format
Provenance
Quality
Clear All
Click and hold a term momentarily to select items
without
that term.
File Format
All
None
txt
10
h5ad
6
csv
4
bam
2
mtx
2
tsv
1
Content Type
All
None
QC metrics
12
sparse gene count matrix
8
alignments
2
barcode to element mapping
2
sequence barcodes
1
file_set
/analysis-sets/PKBDS0534TZQY/
25 Items
100 Items
300 Items
25 items
ID
Accession
Alternate Accessions
Assembly
Content Summary
Content Type
File Format
File Set
Lab
Reference Files
Status
Transcriptome Annotation
Upload Status
UUID
/matrix-files/PKBFI9776MOTY/
PKBFI9776MOTY
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
fa05d4db-1903-4cf1-9339-082f15a27e91
/tabular-files/PKBFI1120KYEQ/
PKBFI1120KYEQ
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
f8189fd0-fbc8-48a9-939f-6b9713c4e3c7
/tabular-files/PKBFI1023CSGB/
PKBFI1023CSGB
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
f761dfa8-9828-4d8d-98c0-e51f68ddd4f9
/tabular-files/PKBFI4817JEIR/
PKBFI4817JEIR
QC metrics
csv
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
edfc5a0c-c8dc-49a1-bbe6-282492b34cb4
/matrix-files/PKBFI2303ISMB/
PKBFI2303ISMB
gene by cell sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
ec470702-2d66-4088-a470-3a082b345a0d
/alignment-files/PKBFI8312IMQD/
PKBFI8312IMQD
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
cb9d8194-6210-4c85-aade-15b0d7cfd4c3
/tabular-files/PKBFI8579EKAP/
PKBFI8579EKAP
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
c9cb9181-7676-4916-891c-b674dbf30054
/matrix-files/PKBFI9508RPNP/
PKBFI9508RPNP
cell by gene sparse gene count matrix
sparse gene count matrix
mtx
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
b71741c3-cd1e-494e-93e4-48f88105210b
/matrix-files/PKBFI7472EHKK/
PKBFI7472EHKK
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
b489d7ef-ddf3-4f20-a9bd-7d1fc4f6b77e
/tabular-files/PKBFI0103LLCO/
PKBFI0103LLCO
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
9c36e8cc-d0b4-49c9-b543-baf1fc0f2fa9
/matrix-files/PKBFI4169NTRH/
PKBFI4169NTRH
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
89ea4459-9850-485d-84dd-c22d6a03d37e
/alignment-files/PKBFI0412YCIJ/
PKBFI0412YCIJ
GRCh38
filtered alignments
alignments
bam
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
879ff80f-22e9-4aef-b7d8-d3a6467cca67
/tabular-files/PKBFI3716WEYF/
PKBFI3716WEYF
barcode to element mapping
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
77d2c870-5526-4d64-88e6-fc825f5d3b07
/tabular-files/PKBFI0924JFEA/
PKBFI0924JFEA
sequence barcodes
csv
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
6115397d-268c-443c-8499-e0505f5b02b2
/tabular-files/PKBFI1018WSCN/
PKBFI1018WSCN
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
60726408-59e9-4fe4-8d8a-de0d77018b3f
/tabular-files/PKBFI1338UGPX/
PKBFI1338UGPX
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
5a12d46a-f144-499a-94d8-f6705a1bdaf7
/tabular-files/PKBFI0200TPUY/
PKBFI0200TPUY
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
4e1ed5e1-7236-42dd-bb60-c641c1edc219
/matrix-files/PKBFI4647FOAY/
PKBFI4647FOAY
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
34601f99-f96f-418b-9ec4-deb424a8edb4
/tabular-files/PKBFI4704AWGV/
PKBFI4704AWGV
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
3424ab62-9c04-41ba-a33e-3055419d9f69
/tabular-files/PKBFI9990LYXJ/
PKBFI9990LYXJ
QC metrics
csv
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
2f77e500-82a0-4a3b-b1d7-dd80b7af5b21
/tabular-files/PKBFI8930IRRH/
PKBFI8930IRRH
barcode to element mapping
tsv
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
1ffdb593-0cd6-4370-a210-d31fedbd40ac
/matrix-files/PKBFI4231NRSZ/
PKBFI4231NRSZ
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
112b98f1-5713-4af8-8a27-1213ee9f58f5
/matrix-files/PKBFI2636ECBO/
PKBFI2636ECBO
gene by cell sparse gene count matrix
sparse gene count matrix
h5ad
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
/reference-files/PKBFI0723SUOK/, /reference-files/PKBFI6475GTLH/
released
validated
0f67454b-f73d-4532-8656-73c1efe2e206
/tabular-files/PKBFI6903DXCF/
PKBFI6903DXCF
QC metrics
csv
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
0ae2d0fd-bda9-4c31-8ff5-5d1650113b18
/tabular-files/PKBFI1709JSZU/
PKBFI1709JSZU
QC metrics
txt
/analysis-sets/PKBDS0534TZQY/
/labs/joyce-niland/
released
validated
05cfc04e-7a5e-4e0c-8d3e-6d39589445f0