PKBDO8101SVXI
PKBDO8101SVXI
released
Clinical summary
Diabetes status
Type 1 Diabetes
Age (y)
38
Age group
18-39
BMI
37.84
Height (cm)
—
Weight (kg)
—
HbA1c %
5
C-Peptide (ng/ml)
9.43
Diabetes duration
20
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 38
- Age group
- 18-39
- Pediatric
- No
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (100%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- T1D stage
- Stage 3: one or more autoantibodies and diagnostic hyperglycemia or T1D diagnosis
- HbA1c-derived diabetes status
- Normal
- Label vs HbA1c discordant
- Yes
- Tier 1 complete
- Yes
- Family history of diabetes
- TRUE
- Family history relationship
- Father, grandfather
- Living donor
- No
- Cause of death
- Cerebrovascular/Stroke
- Donation type
- Donation after brain death
- Hospital stay (h)
- 57
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
-0.002 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.005 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 23:01 | NGS |
| B | 15:01 | 44:02 | NGS |
| C | 03:03 | 05:01 | NGS |
| DPA1 | 01:03 | — | NGS |
| DPB1 | 03:01 | 04:01 | NGS |
| DQA1 | 03:03 | 05:05 | NGS |
| DQB1 | 03:01 | — | NGS |
| DRB1 | 04:01 | 11:01 | NGS |
| DRB3 | 02:02 | — | NGS |
| DRB4 | — | 01:03 | NGS |
| DRB5 | — | — | NGS |
| A | 02 | 23 | RT-PCR |
| B | 15(62) | 44 | RT-PCR |
| Bw4 | 1 | 1 | RT-PCR |
| Bw6 | 1 | 1 | RT-PCR |
| C | 03(9) | 05 | RT-PCR |
| DPB1 | 03:01 | 04:01 | RT-PCR |
| DQA1 | 03 | 05 | RT-PCR |
| DQB1 | 7 | 7 | RT-PCR |
| DR | 4 | 11 | RT-PCR |
| DR51 | 0 | 0 | RT-PCR |
| DR52 | 52 | 0 | RT-PCR |
| DR53 | 53 | 0 | RT-PCR |
Data available
- Datasets
- Genotyping, HLA_typing, Histology, CODEX, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Pancreas, Spleen, Lymph, Peripheral_blood
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Pancreas
histologyAccess dataset
CODEXAccess dataset
Spleen
Lymph
Flow_cytometryAccess dataset
histologyAccess dataset
Peripheral_blood
Flow_cytometryAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-094
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-094
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
