released

PKBDO5476TMJJ

released

RRID RRID:SAMN22562807Program Donor ID SAMN22562807

Clinical summary

Diabetes status

Type 2 Diabetes

Age (y)

Age group

40-64

BMI

38.7

Height (cm)

—

Weight (kg)

—

HbA1c %

7.7

C-Peptide (ng/ml)

1.78

Diabetes duration

AAB summary

none positive

AAB count

Demographics

Age (y): 56
Age group: 40-64
Pediatric: No
Gender: Female
Genetic Sex: Female
Sex discordant: No
Ethnicity: Hispanic
Predicted genetic ancestry: Admixed-American (100%)
Dominant genetic ancestry: Admixed-American

Additional clinical

Diabetes (ontology): MONDO:0005148
T1D stage: No sufficient information to derive
HbA1c-derived diabetes status: Diabetes
Label vs HbA1c discordant: No
Tier 1 complete: Yes
Family history of diabetes: -
Living donor: No
Cause of death: Cerebrovascular/Stroke
Donation type: Donation after brain death
Hospital stay (h): 136
Medication: Unknown medication

Autoantibodies

Summary: none positive
Any positive: No
Tested: Yes
Positive count: 0

GADANegative

13 unit/ml

IAANegative

-0.001 unit/ml

IA2Negative

0 unit/ml

ZNT8Negative

-0.003 unit/ml

HLA typing

Status: X/X

Locus	Allele 1	Allele 2	Method
A	24	24	RT-PCR
B	62	65	RT-PCR
Bw4	0	0	RT-PCR
Bw6	1	1	RT-PCR
C	08	09	RT-PCR
DPB1	04:01	04:01	RT-PCR
DQA1	04	05	RT-PCR
DQB1	4	7	RT-PCR
DR	8	11	RT-PCR
DR51	0	0	RT-PCR
DR52	52	—	RT-PCR
DR53	0	0	RT-PCR

Data available

Datasets: Genotyping, HLA_typing, RNAseq, scRNAseq, Function, Imaging, CyTof, Histology, CODEX, imaging_mass_spec
Tissues: unspecified, Islet, Pancreas, Spleen, Lymph

imaging_mass_specAccess dataset

Spleen

histologyAccess dataset

Lymph

histologyAccess dataset

Supplementary

HPAP

Identifiers

PANC-DB:HPAP-096

Pancreas tissue available: Yes
Other tissues: UBERON:0000948, UBERON:0002113, UBERON:0001264

Publication identifiers

PMID:31127054, PMID:36206763

Description

Human pancreas donor SAMN22562807 in the HPAP database

External resources

PANC-DB:HPAP-096

URL

https://hpap.pmacs.upenn.edu/explore/donor/donor-summary/HPAP-096