PKBDO4145OHBN

released

PKBDO4145OHBN

released
RRID RRID:SAMN25600005Program Donor ID SAMN25600005

Clinical summary

Diabetes status
Type 2 Diabetes
Age (y)
59
Age group
40-64
BMI
29.49
Height (cm)
—
Weight (kg)
—
HbA1c %
7.5
C-Peptide (ng/ml)
1.44
Diabetes duration
5
AAB summary
none positive
AAB count
0

Demographics

Age (y)
59
Age group
40-64
Pediatric
No
Gender
Female
Genetic Sex
Female
Sex discordant
No
Ethnicity
Hispanic
Predicted genetic ancestry
East-Asian (88%), European (7%), Admixed-American (4%), African (1%)
Dominant genetic ancestry
East-Asian

Additional clinical

Diabetes (ontology)
T1D stage
No sufficient information to derive
HbA1c-derived diabetes status
Diabetes
Label vs HbA1c discordant
No
Tier 1 complete
Yes
Family history of diabetes
FALSE
Living donor
No
Cause of death
Cerebrovascular/Stroke
Donation type
Donation after circulatory death
Hospital stay (h)
70
Medication
Metformin

Autoantibodies

Summary
none positive
Any positive
No
Tested
Yes
Positive count
0
GADANegative
0 unit/ml
IAANegative
0 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
0.001 unit/ml

HLA typing

Status: X/X

LocusAllele 1Allele 2Method
A1134RT-PCR
B1361RT-PCR
Bw411RT-PCR
Bw611RT-PCR
C1015RT-PCR
DPB101:0105:01RT-PCR
DQA10101RT-PCR
DQB156RT-PCR
DR1515RT-PCR
DR515:01—RT-PCR
DR5200RT-PCR
DR530—RT-PCR

Data available

Datasets
Genotyping, HLA_typing, scRNAseq, snATACseq, Function, Imaging, CyTof, Histology
Tissues
unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset
HLA_typingAccess dataset

Pancreas

Spleen

Lymph

Supplementary

HPAP
Identifiers
PANC-DB:HPAP-109
Pancreas tissue available
Yes
Other tissues
Publication identifiers
PMID:31127054, PMID:36206763
Description
Human pancreas donor SAMN25600005 in the HPAP database
External resources
PANC-DB:HPAP-109

Attribution

HPAP collection
Data Library