PKBDO2126ZQOL

released

PKBDO2126ZQOL

released
RRID RRID:SAMN19776441Program Donor ID SAMN19776441

Clinical summary

Diabetes status
Control Without Diabetes
Age (y)
3
Age group
0-12
BMI
14.9
Height (cm)
—
Weight (kg)
—
HbA1c %
—
C-Peptide (ng/ml)
0.69
Diabetes duration
—
AAB summary
GADA+
AAB count
1

Demographics

Age (y)
3
Age group
0-12
Pediatric
Yes
Gender
Male
Genetic Sex
Male
Sex discordant
No
Ethnicity
African American
Predicted genetic ancestry
African (44%), Admixed-American (26%), European (14%), South-Asian (11%), East-Asian (5%)
Dominant genetic ancestry
African

Additional clinical

Diabetes (ontology)
No ontology term
T1D stage
No sufficient information to derive
Tier 1 complete
No
Family history of diabetes
FALSE
Living donor
No
Cause of death
Head Trauma
Donation type
Donation after brain death
Hospital stay (h)
118

Autoantibodies

Summary
GADA+
Any positive
Yes
Tested
Yes
Positive count
1
GADAPositive
95 unit/ml
1
IAANegative
0.006 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.005 unit/ml

HLA typing

LocusAllele 1Allele 2Method
A01:0124:03NGS
A124RT-PCR
B08:0151:01NGS
B851RT-PCR
C07:0115:02NGS
C715RT-PCR
DPA10102RT-PCR
DPA101:0302:01NGS
DPB104:0113:01GNGS
DQA10101RT-PCR
DQA101:0101:02NGS
DQB10505RT-PCR
DQB105:0105:02NGS
DRB10116RT-PCR
DRB101:0116:02NGS
DRB5—02:02NGS

Data available

Datasets
Genotyping, HLA_typing, RNAseq, ATAC-seq, Function, Morphology, CyTof, WGBS, Histology, CODEX, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
Tissues
unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset
HLA_typingAccess dataset

Pancreas

imaging_mass_specAccess dataset

Spleen

Lymph

Supplementary

HPAP
Identifiers
PANC-DB:HPAP-009
Pancreas tissue available
Yes
Other tissues
Publication identifiers
PMID:31127054, PMID:36206763
Description
Human pancreas donor SAMN19776441 in the HPAP database
External resources
PANC-DB:HPAP-009

Attribution

HPAP collection
Data Library