Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
Analysis Set
/
PKBDS6404KQVT
PKBDS6404KQVT
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-015
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN18741942 in the HPAP database HPAP-015
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM4813IAIY
PrimaryCell
type B pancreatic cell
type B pancreatic cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO0188CMQS
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS1357KHJW
bulk RNA-seq assay (RNA-seq)
PKBSM4813IAIY
type B pancreatic cell, male, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI0869JEPV
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI1930UFTJ
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI2855BUTH
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI3704ONEH
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI5979GCRX
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI7863RMDT
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI7912LQYL
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI8356HMKH
txt
QC metrics
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217