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Analysis Set
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PKBDS4989WACC
PKBDS4989WACC
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-045
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN19776476 in the HPAP database HPAP-045
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM9968PWTC
PrimaryCell
type B pancreatic cell
type B pancreatic cell, female, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO5081ZNPY
female
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS1334NHNU
bulk RNA-seq assay (RNA-seq)
PKBSM9968PWTC
type B pancreatic cell, female, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI1153XIAZ
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI1848NAOY
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI2790TLIJ
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI5531CGRB
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI5703PRGR
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI7262PSIC
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI8928VWPM
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI9656URIF
txt
QC metrics
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217