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Analysis Set
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PKBDS0404NMBU
PKBDS0404NMBU
released
Json view
File Set Type
intermediate analysis
Submitter Comment
HPAP-055
Summary
intermediate analysis of scRNA-seq data
Description
Analysis set of scRNA-seq for islet biosample of human donor HPAP-055 from HPAP with no_treatment (HPAP-055)
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM3422VIKK
PrimaryIslet
islet of Langerhans
islet of Langerhans cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO1384BFXE
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS6860JLLX
single-cell RNA sequencing assay (scRNA-seq)
PKBSM3422VIKK
islet of Langerhans cell, male, Homo sapiens
Files
25 items
1
2
3
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI0303YQKY
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI0345QFJA
txt
barcode to element mapping
Klaus Kaestner, UPenn
validated
PKBFI0367WARF
h5ad
sparse gene count matrix
Klaus Kaestner, UPenn
validated
PKBFI0440MKTS
tsv
barcode to element mapping
Klaus Kaestner, UPenn
validated
PKBFI0561DNAO
csv
sequence barcodes
Klaus Kaestner, UPenn
validated
PKBFI0906CEIG
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI1167UJPT
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI1438FKLO
mtx
sparse gene count matrix
Klaus Kaestner, UPenn
validated
PKBFI1675HYWR
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI1976UVPL
h5ad
sparse gene count matrix
Klaus Kaestner, UPenn
validated
Attribution
Funding
U01DK123594