NextFlow pipeline for 10X sn/scRNA-seq data processing

{
    "@context": "/terms/",
    "@id": "/workflows/PKBWF7216YNOL/",
    "@type": [
        "Workflow",
        "Item"
    ],
    "accession": "PKBWF7216YNOL",
    "aliases": [
        "pankbase:sn_scRNAseq-Nextflow"
    ],
    "analysis_steps": [],
    "audit": {},
    "award": {
        "@id": "/awards/U24DK138512/",
        "component": "data coordination"
    },
    "collections": [
        "PanKbase"
    ],
    "creation_timestamp": "2025-01-10T04:53:19.672286+00:00",
    "description": "This repository contains all components of the sn/scRNA-seq pipeline developed in the Parker Lab, including alignment, ambient RNA removal and quality control.",
    "lab": {
        "@id": "/labs/pankbase-consortium/",
        "title": "Pankbase Consortium, PanKbase"
    },
    "name": "NextFlow pipeline for 10X sn/scRNA-seq data processing",
    "notes": "PanKbase sn/scRNA-seq pipeline",
    "release_timestamp": "2025-01-10T04:54:41.910994+00:00",
    "schema_version": "4",
    "source_url": "https://github.com/ParkerLab/snRNAseq-NextFlow",
    "status": "released",
    "submitted_by": {
        "@id": "/users/7e95dcd6-9c35-4082-9c53-09d14c5752be/",
        "title": "Parul Kudtarkar"
    },
    "submitter_comment": "All steps are run through nextflow pipeline management and all tools are containerized.",
    "summary": "PKBWF7216YNOL",
    "uuid": "556f3315-0b31-476f-9dab-e916d41d5c55",
    "workflow_repositories": [
        "https://github.com/ParkerLab/snRNAseq-NextFlow"
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}