PKBFI2005LIQZ

released
validated
{
    "@context": "/terms/",
    "@id": "/tabular-files/PKBFI2005LIQZ/",
    "@type": [
        "TabularFile",
        "File",
        "Item"
    ],
    "accession": "PKBFI2005LIQZ",
    "aliases": [
        "klaus-kaestner:pancreaticBetaCell_AnalysisSet_RNAseq_HPAP-013_PICARD-metrics"
    ],
    "analysis_step_version": "/analysis-step-versions/29da2cbc-42cc-4a39-9e90-9486cb4b31c8/",
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/UC4DK112217/"
    },
    "content_type": "QC metrics",
    "controlled_access": false,
    "creation_timestamp": "2025-04-17T22:25:55.242740+00:00",
    "derived_from": [
        "/alignment-files/PKBFI9145NUVO/"
    ],
    "description": "The file contains statistics on duplicate reads, including the number of marked duplicates and related metrics.",
    "file_format": "txt",
    "file_set": "/analysis-sets/PKBDS7269IYLP/",
    "file_url": "https://pankbase-data-v1.s3.us-west-2.amazonaws.com/processed_data/bulk_RNA/sorted_beta/SAMN19776445/HPAP-013.Aligned.sortedByCoord.out.md.marked_dup_metrics.txt",
    "gene_list_for": [],
    "href": "/tabular-files/PKBFI2005LIQZ/@@download/PKBFI2005LIQZ.txt.gz",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/klaus-kaestner/",
        "title": "Klaus Kaestner, UPenn"
    },
    "loci_list_for": [],
    "md5sum": "45bc07e4696b7c1ce327cc8c642a01ab",
    "release_timestamp": "2025-06-15T05:39:06.156103+00:00",
    "schema_version": "11",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "summary": "GRCh38 QC metrics",
    "upload_status": "validated",
    "uuid": "a802d7ac-e4b3-42b4-84ca-110c6465c7f6"
}