Funding Opportunities

Integrated Cell Browser

Donor Summary Data Library APIs

Integrated Cell Browser Genome Browser Integrated Cell Browser Differential Gene Expression Browser Gene Browser Functional Browser PCA Explorer Analytical Library Metadata Standards Tools | Pipelines Publications

PanKbase Program People Policies Related Programs Collaborate Funding Opportunities

Contact | Feedback Tutorials GitHub News

beta

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Metadata and Data Standards

Metadata and Data Standards

Metadata Standards

Human Donors
Human donor meta-data standards.
Islet Biosamples
Islet biosample meta-data standards.
Human Beta Cell Lines
Human beta cell line meta-data standards.
File Formats
Formats for common file types.
Sequence Based Experiments
Sequence based assay meta-data standards.
Islet Function Experiment
Islet function experiment meta-data standards.

Data Processing Standards

Bulk RNA-seq
Bulk RNA-seq data standards.
Single Cell RNA-seq (scRNA-seq)
Single cell RNA-seq processing pipeline standards.
Single Nucleus ATAC-seq (snATAC-seq)
Single nucleus ATAC-seq data standards.
Islet Dynamic Perifusion
Islet dynamic perifusion data processing standards.

Integrated Cell Browser

Donor Summary Data Library APIs

Integrated Cell Browser Genome Browser Integrated Cell Browser Differential Gene Expression Browser Gene Browser Functional Browser PCA Explorer Analytical Library Metadata Standards Tools | Pipelines Publications

PanKbase Program People Policies Related Programs Collaborate Funding Opportunities

Contact | Feedback Tutorials GitHub News

Bluesky

GitHub

Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies