rna-seqc

{
    "@context": "/terms/",
    "@id": "/software/rna-seqc/",
    "@type": [
        "Software",
        "Item"
    ],
    "aliases": [
        "kyle-gaulton:software_RNA-SeQC"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released software [rna-seqc](/software/rna-seqc/) has deleted subobject award [U24DK13851](/awards/U24DK13851/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/software/rna-seqc/"
            }
        ]
    },
    "award": {
        "@id": "/awards/U24DK13851/",
        "component": "data coordination"
    },
    "creation_timestamp": "2024-12-04T00:03:14.970895+00:00",
    "description": "RNA-SeQC 2, an efficient reimplementation of RNA-SeQC (DeLuca et al., 2012) that adds multiple metrics designed to characterize sample quality across a wide range of RNA-seq protocols.",
    "lab": {
        "@id": "/labs/pankbase-consortium/",
        "title": "Pankbase Consortium, PanKbase"
    },
    "name": "rna-seqc",
    "publication_identifiers": [
        "PMID:33677499",
        "PMCID:PMC8479667",
        "doi:10.1093/bioinformatics/btab135"
    ],
    "release_timestamp": "2025-01-10T07:54:05.548034+00:00",
    "schema_version": "5",
    "source_url": "https://github.com/getzlab/rnaseqc",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "summary": "rna-seqc",
    "title": "RNA-SeQC",
    "used_by": [
        "processing pipelines"
    ],
    "uuid": "8599e866-2b89-4464-83bd-300653ed5d31",
    "versions": [
        "/software-versions/rna-seqc-v2.4.2/"
    ]
}