Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic;T1D autoantibody positive (Aab+);T1D;and T2D donors from the Human Pancreas Analysis Program
A Data and Administrative Coordinating Center for the PanKbase Consortium
Summary
resource analysis of snATAC-seq data
released
MeasurementSet
PKBDS1142YHBX
single-cell RNA sequencing assay (scRNA-seq)
THE HUMAN PANCREAS ANALYSIS PROGRAM FOR TYPE 2 DIABETES
Sample Summary
islet of Langerhans cell, male, Homo sapiens
released
AnalysisSet
PKBDS9687AMNO
Unified peaks of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic;T1D autoantibody positive (Aab+);T1D;and T2D donors from the Human Pancreas Analysis Program
PENN INTEGRATED HUMAN PANCREAS PROCUREMENT AND ANALYSIS PROGRAM
Sample Summary
islet of Langerhans cell, male, Homo sapiens
released
AnalysisSet
PKBDS6081BXIH
intermediate analysis of snATAC-seq data
A Data and Administrative Coordinating Center for the PanKbase Consortium
Summary
intermediate analysis of snATAC-seq data
released
AnalysisSet
PKBDS7347KYDD
Analysis set of scRNA-seq for islet biosample of human donor HPAP-056 from HPAP with no_treatment (HPAP-056)
A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515
Summary
intermediate analysis of scRNA-seq data
released
AnalysisSet
PKBDS1349YHGQ
Reference map of islet cell type-specific gene expression derived from single cell RNA-seq assays of 191 samples (140 donors) from HPAP;IIDP and Prodo.
A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515
Summary
resource analysis of scRNA-seq data
released
MeasurementSet
PKBDS9268STQT
single-cell RNA sequencing assay (scRNA-seq)
PENN INTEGRATED HUMAN PANCREAS PROCUREMENT AND ANALYSIS PROGRAM