Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic;T1D autoantibody positive (Aab+);T1D;and T2D donors from the Human Pancreas Analysis Program
A Data and Administrative Coordinating Center for the PanKbase Consortium
Summary
resource analysis of snATAC-seq data
released
MeasurementSet
PKBDS6549OGVW
single-cell ATAC-seq (snATAC-seq)
PENN INTEGRATED HUMAN PANCREAS PROCUREMENT AND ANALYSIS PROGRAM
Sample Summary
islet of Langerhans cell, male, Homo sapiens
released
AnalysisSet
PKBDS9065PIOE
intermediate analysis of snATAC-seq data
A Data and Administrative Coordinating Center for the PanKbase Consortium
Summary
intermediate analysis of snATAC-seq data
released
AnalysisSet
PKBDS9687AMNO
Unified peaks of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic;T1D autoantibody positive (Aab+);T1D;and T2D donors from the Human Pancreas Analysis Program
Analysis set of scRNA-seq for islet biosample of human donor HPAP-106 from HPAP with no_treatment (HPAP-106)
A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515
Summary
intermediate analysis of scRNA-seq data
released
MeasurementSet
PKBDS6514MMXU
single-cell RNA sequencing assay (scRNA-seq)
PENN INTEGRATED HUMAN PANCREAS PROCUREMENT AND ANALYSIS PROGRAM
Sample Summary
islet of Langerhans cell, male, Homo sapiens
released
MeasurementSet
PKBDS5166CTBU
single-cell RNA sequencing assay (scRNA-seq)
THE HUMAN PANCREAS ANALYSIS PROGRAM FOR TYPE 2 DIABETES
Sample Summary
islet of Langerhans cell, male, Homo sapiens
released
AnalysisSet
PKBDS1349YHGQ
Reference map of islet cell type-specific gene expression derived from single cell RNA-seq assays of 191 samples (140 donors) from HPAP;IIDP and Prodo.
A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515