{
"@context": "/terms/",
"@id": "/primary-islet/PKBSM9608KYPD/",
"@type": [
"PrimaryIslet",
"Biosample",
"Sample",
"Item"
],
"accession": "PKBSM9608KYPD",
"age": "unknown",
"aliases": [
"joyce-niland:SAMN11522709_scRNAseq_initialBiosample"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing sample",
"detail": "Primary islet [PKBSM9608KYPD](/primary-islet/PKBSM9608KYPD/) has only 1 child sample [PKBSM4700ATWO](/primary-islet/PKBSM4700ATWO/) in `origin_of`. Parent samples are expected to have multiple child samples.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_parent_sample_with_singular_child",
"path": "/primary-islet/PKBSM9608KYPD/"
}
],
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM9608KYPD](/primary-islet/PKBSM9608KYPD/) is missing tier 2 field `rrid`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM9608KYPD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM9608KYPD](/primary-islet/PKBSM9608KYPD/) is missing tier 2 field `warm_ischaemia_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM9608KYPD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM9608KYPD](/primary-islet/PKBSM9608KYPD/) is missing tier 2 field `hand_picked`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM9608KYPD/"
}
]
},
"award": {
"@id": "/awards/U24DK098085/"
},
"classifications": [
"primary islet"
],
"cold_ischaemia_time": 6.36,
"creation_timestamp": "2024-12-20T19:39:00.837825+00:00",
"date_obtained": "2019-04-27",
"description": "Islet biosample from human donor SAMN11522709 in the IIDP database",
"donors": [
"/human-donors/PKBDO5176FHKO/"
],
"file_sets": [],
"institutional_certificates": [],
"islet_function_available": true,
"islet_histology": true,
"islet_morphology": true,
"islet_yield": 284983,
"isolation_center": "Islet Cell Resource Centers (ICR)",
"lab": {
"@id": "/labs/joyce-niland/",
"title": "Joyce Niland, CoH"
},
"multiplexed_in": [],
"organ_source": "deceased",
"origin_of": [
"/primary-islet/PKBSM4700ATWO/"
],
"parts": [],
"pooled_in": [],
"pre_shipment_culture_time": 33,
"prep_viability": 96,
"purity": [
"85"
],
"release_timestamp": "2025-01-10T01:50:56.045088+00:00",
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0000006/",
"term_name": "islet of Langerhans"
}
],
"schema_version": "19",
"sex": "male",
"sorted_fractions": [],
"sources": [
{
"@id": "/labs/joyce-niland/",
"title": "Joyce Niland, CoH"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "From donor PKBDO5176FHKO",
"summary": "islet of Langerhans cell, male, Homo sapiens",
"taxa": "Homo sapiens",
"uuid": "fbd8fdf6-b39b-4176-ab09-92e9d73bc08d",
"virtual": false
}