{
"@context": "/terms/",
"@id": "/primary-islet/PKBSM8735ZHPC/",
"@type": [
"PrimaryIslet",
"Biosample",
"Sample",
"Item"
],
"accession": "PKBSM8735ZHPC",
"age": "unknown",
"aliases": [
"joyce-niland:SAMN15337453_scRNAseq_secondaryBiosample_untreated"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `rrid`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `organ_source`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `prep_viability`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `warm_ischaemia_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `purity`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `hand_picked`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `pre_shipment_culture_time`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM8735ZHPC](/primary-islet/PKBSM8735ZHPC/) is missing tier 2 field `islet_function_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM8735ZHPC/"
}
]
},
"award": {
"@id": "/awards/U24DK098085/"
},
"classifications": [
"primary islet"
],
"cold_ischaemia_time": 10.2,
"creation_timestamp": "2025-01-08T05:36:26.416794+00:00",
"description": "Islet biosample from human donor SAMN15337453, untreated",
"donors": [
"/human-donors/PKBDO9758KKQK/"
],
"file_sets": [
{
"@id": "/measurement-sets/PKBDS4072KSEL/",
"accession": "PKBDS4072KSEL",
"aliases": [
"joyce-niland:SAMN15337453_scRNAseq_assay_untreated"
],
"assay_term": {
"term_name": "single-cell RNA sequencing assay"
},
"lab": {
"title": "Joyce Niland, CoH"
},
"status": "released",
"summary": "single-cell RNA sequencing assay (scRNA-seq)"
}
],
"institutional_certificates": [],
"isolation_center": "Prodo",
"lab": {
"@id": "/labs/joyce-niland/",
"title": "Joyce Niland, CoH"
},
"multiplexed_in": [],
"origin_of": [],
"originated_from": "/primary-islet/PKBSM5499UBIL/",
"parts": [],
"pooled_in": [],
"release_timestamp": "2025-01-10T01:50:49.241328+00:00",
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0000006/",
"term_name": "islet of Langerhans"
}
],
"schema_version": "19",
"sex": "male",
"sorted_fractions": [],
"sources": [
{
"@id": "/labs/joyce-niland/",
"title": "Joyce Niland, CoH"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "From study GSE221156",
"summary": "islet of Langerhans cell, male, Homo sapiens",
"taxa": "Homo sapiens",
"uuid": "f078fb40-509a-47d6-be95-45dbab856a99",
"virtual": false
}