{
"@context": "/terms/",
"@id": "/primary-islet/PKBSM4458MTDK/",
"@type": [
"PrimaryIslet",
"Biosample",
"Sample",
"Item"
],
"accession": "PKBSM4458MTDK",
"age": "50",
"age_units": "year",
"aliases": [
"klaus-kaestner:biosample_HPAP-126"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM4458MTDK](/primary-islet/PKBSM4458MTDK/) is missing tier 2 field `warm_ischaemia_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM4458MTDK/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM4458MTDK](/primary-islet/PKBSM4458MTDK/) is missing tier 2 field `pre_shipment_culture_time`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM4458MTDK/"
}
]
},
"award": {
"@id": "/awards/U01DK123594/"
},
"classifications": [
"primary islet"
],
"cold_ischaemia_time": 10.23,
"creation_timestamp": "2024-12-04T20:10:59.514451+00:00",
"date_obtained": "2022-06-15",
"description": "Islet biosample from human donor SAMN30486796 in the HPAP database",
"donors": [
"/human-donors/PKBDO5300GOES/"
],
"file_sets": [
{
"@id": "/measurement-sets/PKBDS9353VZUV/",
"accession": "PKBDS9353VZUV",
"aliases": [
"klaus-kaestner:scRNAseq_IsletCells_HPAP-126"
],
"assay_term": {
"term_name": "single-cell RNA sequencing assay"
},
"lab": {
"title": "Klaus Kaestner, UPenn"
},
"status": "released",
"summary": "single-cell RNA sequencing assay (scRNA-seq)"
}
],
"hand_picked": true,
"institutional_certificates": [],
"islet_function_available": true,
"islet_histology": true,
"islet_morphology": true,
"islet_yield": 589154,
"isolation_center": "University of Pennsylvania (Upenn)",
"lab": {
"@id": "/labs/klaus-kaestner/",
"title": "Klaus Kaestner, UPenn"
},
"lower_bound_age": 50,
"lower_bound_age_in_hours": 438000,
"multiplexed_in": [],
"organ_source": "deceased",
"origin_of": [],
"pancreas_weight": 5435,
"parts": [],
"pooled_in": [],
"prep_viability": 90,
"preservation_method": [
"UW"
],
"purity": [
"95",
"30"
],
"release_timestamp": "2025-01-10T01:49:36.540493+00:00",
"rrid": "RRID:SAMN30486796",
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0000006/",
"term_name": "islet of Langerhans"
}
],
"schema_version": "19",
"sex": "female",
"sorted_fractions": [],
"sources": [
{
"@id": "/labs/klaus-kaestner/",
"title": "Klaus Kaestner, UPenn"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "PKBDO5300GOES",
"summary": "islet of Langerhans cell, female, Homo sapiens",
"taxa": "Homo sapiens",
"upper_bound_age": 50,
"upper_bound_age_in_hours": 438000,
"uuid": "261c1a74-9bce-4516-b411-1d7f0fbdead0",
"virtual": false
}