{
"@context": "/terms/",
"@id": "/primary-islet/PKBSM3913UCNF/",
"@type": [
"PrimaryIslet",
"Biosample",
"Sample",
"Item"
],
"accession": "PKBSM3913UCNF",
"age": "unknown",
"aliases": [
"prodo:HP-19047-01_scRNAseq_initialBiosample"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing sample",
"detail": "Primary islet [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) has only 1 child sample [PKBSM7579GNPI](/primary-islet/PKBSM7579GNPI/) in `origin_of`. Parent samples are expected to have multiple child samples.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_parent_sample_with_singular_child",
"path": "/primary-islet/PKBSM3913UCNF/"
}
],
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `rrid`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `prep_viability`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `warm_ischaemia_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `purity`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `hand_picked`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBSM3913UCNF](/primary-islet/PKBSM3913UCNF/) is missing tier 2 field `pre_shipment_culture_time`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/primary-islet/PKBSM3913UCNF/"
}
]
},
"award": {
"@id": "/awards/PSEUDO2/"
},
"classifications": [
"primary islet"
],
"cold_ischaemia_time": 13.22,
"creation_timestamp": "2024-12-20T19:37:44.366642+00:00",
"date_obtained": "2019-02-16",
"description": "Islet biosample from human donor HP-19047-01 in the Prodo database",
"donors": [
"/human-donors/PKBDO8020WRAX/"
],
"file_sets": [],
"institutional_certificates": [],
"islet_function_available": false,
"islet_histology": false,
"islet_morphology": false,
"isolation_center": "Prodo",
"lab": {
"@id": "/labs/prodo-laboratories/",
"title": "Prodo Laboratories, PRODO"
},
"multiplexed_in": [],
"organ_source": "deceased",
"origin_of": [
"/primary-islet/PKBSM7579GNPI/"
],
"parts": [],
"pooled_in": [],
"release_timestamp": "2025-01-10T01:51:04.973200+00:00",
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0000006/",
"term_name": "islet of Langerhans"
}
],
"schema_version": "19",
"sex": "female",
"sorted_fractions": [],
"sources": [
{
"@id": "/labs/prodo-laboratories/",
"title": "Prodo Laboratories, PRODO"
}
],
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "From donor PKBDO8020WRAX",
"summary": "islet of Langerhans cell, female, Homo sapiens",
"taxa": "Homo sapiens",
"uuid": "faa39ca0-c7eb-45e1-899e-039b80578bef",
"virtual": false
}