islet of Langerhans — PKBSM3176EUIT

released
{
    "@context": "/terms/",
    "@id": "/primary-islet/PKBSM3176EUIT/",
    "@type": [
        "PrimaryIslet",
        "Biosample",
        "Sample",
        "Item"
    ],
    "accession": "PKBSM3176EUIT",
    "age": "unknown",
    "aliases": [
        "prodo:HP18306-01_scRNAseq_initialBiosample"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "missing sample",
                "detail": "Primary islet [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) has only 1 child sample [PKBSM7976MYGN](/primary-islet/PKBSM7976MYGN/) in `origin_of`. Parent samples are expected to have multiple child samples.",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_parent_sample_with_singular_child",
                "path": "/primary-islet/PKBSM3176EUIT/"
            }
        ],
        "WARNING": [
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `rrid`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `prep_viability`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `warm_ischaemia_duration`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `purity`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `hand_picked`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBSM3176EUIT](/primary-islet/PKBSM3176EUIT/) is missing tier 2 field `pre_shipment_culture_time`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/primary-islet/PKBSM3176EUIT/"
            }
        ]
    },
    "award": {
        "@id": "/awards/PSEUDO2/"
    },
    "classifications": [
        "primary islet"
    ],
    "cold_ischaemia_time": 5.57,
    "creation_timestamp": "2024-12-20T19:37:39.300044+00:00",
    "date_obtained": "2018-11-02",
    "description": "Islet biosample from human donor HP18306-01 in the Prodo database",
    "donors": [
        "/human-donors/PKBDO4563KUHK/"
    ],
    "file_sets": [],
    "institutional_certificates": [],
    "islet_function_available": false,
    "islet_histology": false,
    "islet_morphology": false,
    "isolation_center": "Prodo",
    "lab": {
        "@id": "/labs/prodo-laboratories/",
        "title": "Prodo Laboratories, PRODO"
    },
    "multiplexed_in": [],
    "organ_source": "deceased",
    "origin_of": [
        "/primary-islet/PKBSM7976MYGN/"
    ],
    "parts": [],
    "pooled_in": [],
    "release_timestamp": "2025-01-10T01:51:00.728039+00:00",
    "sample_terms": [
        {
            "@id": "/sample-terms/UBERON_0000006/",
            "term_name": "islet of Langerhans"
        }
    ],
    "schema_version": "19",
    "sex": "male",
    "sorted_fractions": [],
    "sources": [
        {
            "@id": "/labs/prodo-laboratories/",
            "title": "Prodo Laboratories, PRODO"
        }
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "From donor PKBDO4563KUHK",
    "summary": "islet of Langerhans cell, male, Homo sapiens",
    "taxa": "Homo sapiens",
    "uuid": "feade608-0e86-4d25-a626-bf89f4394b68",
    "virtual": false
}