pancreatic A cell — PKBSM7606DEFH

{
    "@context": "/terms/",
    "@id": "/primary-cells/PKBSM7606DEFH/",
    "@type": [
        "PrimaryCell",
        "Biosample",
        "Sample",
        "Item"
    ],
    "accession": "PKBSM7606DEFH",
    "age": "unknown",
    "aliases": [
        "klaus-kaestner:pancreaticAlphaCell_HPAP-092"
    ],
    "audit": {
        "ERROR": [
            {
                "category": "inconsistent parent sample",
                "detail": "Primary cell [PKBSM7606DEFH](/primary-cells/PKBSM7606DEFH/) has metadata properties (`islet_function_available`, `rrid`, `islet_histology`, `pancreas_weight`, `sample_terms`, `islet_yield`, `pre_shipment_culture_time`, `isolation_center`, `lower_bound_age`, `hand_picked`, `cold_ischaemia_time`, `purity`, `age_units`, `islet_morphology`, `upper_bound_age`, `preservation_method`, `prep_viability`, `organ_source`) inconsistent with its associated parent sample [PKBSM3631FIZB](/primary-islet/PKBSM3631FIZB/). Samples that are sorted from or part of a parent sample are expected to share most of the parent's metadata properties.",
                "level": 60,
                "level_name": "ERROR",
                "name": "audit_sample_sorted_from_parent_child_check",
                "path": "/primary-cells/PKBSM7606DEFH/"
            }
        ],
        "WARNING": [
            {
                "category": "missing age",
                "detail": "Primary cell [PKBSM7606DEFH](/primary-cells/PKBSM7606DEFH/) is missing `upper_bound_age`, `lower_bound_age`, and `age_units`. Tissues, primary cells, and whole organisms are expected to specify a lower bound age, upper bound age, and age units.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_biosample_age",
                "path": "/primary-cells/PKBSM7606DEFH/"
            }
        ]
    },
    "award": {
        "@id": "/awards/UC4DK112217/"
    },
    "classifications": [
        "primary cell"
    ],
    "creation_timestamp": "2024-12-04T21:44:41.535942+00:00",
    "description": "Pancreatic alpha cell of islet biosample from human donor SAMN19842621 in the HPAP database HPAP-092",
    "donors": [
        "/human-donors/PKBDO9628VDCG/"
    ],
    "file_sets": [
        {
            "@id": "/measurement-sets/PKBDS3204NZXY/",
            "accession": "PKBDS3204NZXY",
            "aliases": [
                "klaus-kaestner:pancreaticAlphaCell_MeasurementSet_RNAseq_HPAP-092"
            ],
            "assay_term": {
                "term_name": "bulk RNA-seq assay"
            },
            "lab": {
                "title": "Klaus Kaestner, UPenn"
            },
            "status": "released",
            "summary": "bulk RNA-seq assay (RNA-seq)"
        },
        {
            "@id": "/analysis-sets/PKBDS4327QYTG/",
            "accession": "PKBDS4327QYTG",
            "aliases": [
                "klaus-kaestner:pancreaticAlphaCell_AnalysisSet_RNAseq_HPAP-092"
            ],
            "lab": {
                "title": "Klaus Kaestner, UPenn"
            },
            "status": "released",
            "summary": "intermediate analysis of RNA-seq data"
        }
    ],
    "institutional_certificates": [],
    "lab": {
        "@id": "/labs/klaus-kaestner/",
        "title": "Klaus Kaestner, UPenn"
    },
    "multiplexed_in": [],
    "origin_of": [],
    "part_of": "/primary-islet/PKBSM3631FIZB/",
    "parts": [],
    "pooled_in": [],
    "release_timestamp": "2025-01-10T01:50:09.489676+00:00",
    "sample_terms": [
        {
            "@id": "/sample-terms/CL_0000171/",
            "term_name": "pancreatic A cell"
        }
    ],
    "schema_version": "19",
    "sex": "male",
    "sorted_fractions": [],
    "sources": [
        {
            "@id": "/labs/klaus-kaestner/",
            "title": "Klaus Kaestner, UPenn"
        }
    ],
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "summary": "pancreatic A cell, male, Homo sapiens",
    "taxa": "Homo sapiens",
    "uuid": "be395ab8-7811-47d2-9f50-32fb7bab7e62",
    "virtual": false
}