PKBFI9974GDZJ

{
    "@context": "/terms/",
    "@id": "/matrix-files/PKBFI9974GDZJ/",
    "@type": [
        "MatrixFile",
        "File",
        "Item"
    ],
    "accession": "PKBFI9974GDZJ",
    "aliases": [
        "joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_doubletFiinderMatrix_matrix.mtx"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/U24DK098085/"
    },
    "content_summary": "cell by gene sparse gene count matrix",
    "content_type": "sparse gene count matrix",
    "creation_timestamp": "2025-05-20T20:58:18.541937+00:00",
    "dimension1": "cell",
    "dimension2": "gene",
    "file_format": "mtx",
    "file_set": "/analysis-sets/PKBDS0269YCWP/",
    "file_url": "https://pankbase-data-v1.s3.us-west-2.amazonaws.com/processed_data/single_cell_RNA/202503_freeze_intermediate_files/doubletfinder_round1/pass-qc-nuclei-counts-with-doublets/SRR12831416.matrix.mtx",
    "gene_list_for": [],
    "href": "/matrix-files/PKBFI9974GDZJ/@@download/PKBFI9974GDZJ.mtx",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/joyce-niland/",
        "title": "Joyce Niland, CoH"
    },
    "loci_list_for": [],
    "md5sum": "fb25193b1359e8b52bcb6962e0f6f104",
    "reference_files": [
        "/reference-files/PKBFI6475GTLH/",
        "/reference-files/PKBFI0723SUOK/"
    ],
    "release_timestamp": "2025-06-15T05:58:23.818601+00:00",
    "schema_version": "6",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_qc.txt;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_knee.txt;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_pass.txt;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_cell_barcodes.csv;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.05.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.05_filtered.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.05_metrics.csv;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.05_report.html;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.1.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.1_filtered.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.1_metrics.csv;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.1_report.html;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.15.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Matrix_cellbender_FPR_0.15_filtered.h5;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.15_metrics.csv;joyce-niland:Prodo_scRNAseq_SRR12831416_infected_with_SARS-CoV-2_Tabular_cellbender_FPR_0.15_report.html",
    "summary": "cell by gene sparse gene count matrix",
    "upload_status": "validated",
    "uuid": "c97934c8-e592-4396-8f96-1981eee87482"
}