PKBDO8738VHSZ

{
    "@context": "/terms/",
    "@id": "/human-donors/PKBDO8738VHSZ/",
    "@type": [
        "HumanDonor",
        "Donor",
        "Item"
    ],
    "accession": "PKBDO8738VHSZ",
    "age": 60,
    "aliases": [
        "joyce-niland:SAMN16547514"
    ],
    "audit": {
        "WARNING": [
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 2 field `diabetes_status_hba1c`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 2 field `glucose_loweing_theraphy`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 2 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 2 field `donation_type`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_desired_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `dbxrefs`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `phenotypic_features`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `family_history_of_diabetes`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `biological_sex`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `diabetes_duration`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `c_peptide`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_gada`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_gada_value`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_ia2`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_ia2_value`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_znt8`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `aab_znt8_value`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            },
            {
                "category": "missing tier 3 field",
                "detail": "Human donor [PKBDO8738VHSZ](/human-donors/PKBDO8738VHSZ/) is missing tier 3 field `documents`.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_optional_fields",
                "path": "/human-donors/PKBDO8738VHSZ/"
            }
        ]
    },
    "award": {
        "@id": "/awards/U24DK098085/"
    },
    "bmi": 28.3,
    "cause_of_death": "Head trauma",
    "center_donor_id": "SAMN16547514",
    "collections": [
        "IIDP",
        "Prodo"
    ],
    "creation_timestamp": "2024-12-03T20:37:19.108393+00:00",
    "data_available": [
        {
            "dataset": "scRNAseq",
            "dataset_link": "https://www.ncbi.nlm.nih.gov/geo/",
            "dataset_tissue": "Islet"
        }
    ],
    "description": "Human donor SAMN16547514 in the IIDP database",
    "diabetes_status": [],
    "diabetes_status_description": "non-diabetic",
    "ethnicities": [
        "Hispanic"
    ],
    "genetic_ethnicities": [
        {
            "ethnicity": "Admixed-American",
            "percentage": 97
        },
        {
            "ethnicity": "South-Asian",
            "percentage": 2
        },
        {
            "ethnicity": "European",
            "percentage": 1
        }
    ],
    "hba1c": 4.6,
    "hla_typing": [
        "A,68-68,OPO",
        "B,35-65,OPO",
        "C,7-8,OPO",
        "Bw4,0-.,OPO",
        "Bw6,1-.,OPO",
        "DR,1-4,OPO",
        "DR51,0-.,OPO",
        "DR52,0-.,OPO",
        "DR53,1-.,OPO",
        "DQ,5-8,OPO"
    ],
    "hospital_stay": 193,
    "human_donor_identifiers": [
        "IIDP:SAMN16547514",
        "Prodo:HP-20297-01",
        "HIPP:HIPP383"
    ],
    "lab": {
        "@id": "/labs/joyce-niland/",
        "title": "Joyce Niland, CoH"
    },
    "living_donor": false,
    "notes": "other disease states: hypertension",
    "other_tissues_available": [],
    "pancreas_tissue_available": false,
    "publication_identifiers": [
        "PMID:19366778",
        "PMID:22889479",
        "PMID:20447343"
    ],
    "release_timestamp": "2025-01-10T01:42:38.870174+00:00",
    "rrid": "RRID:SAMN16547514",
    "schema_version": "16",
    "sex": "female",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "Meta-data was obtained directly from IIDP",
    "summary": "Hispanic female",
    "taxa": "Homo sapiens",
    "url": "https://iidp.coh.org/Resources-Offered/Research-Data-Repository",
    "uuid": "c71c0a0a-20b3-482b-bcaa-d2ea1c17b71c",
    "virtual": false
}