{
"@context": "/terms/",
"@id": "/human-donors/PKBDO8076DOPQ/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"aab_gada": true,
"aab_gada_assay": [],
"aab_ia2": false,
"aab_ia2_assay": [],
"aab_iaa": true,
"aab_iaa_assay": [],
"aab_znt8": true,
"aab_znt8_assay": [],
"accession": "PKBDO8076DOPQ",
"age": 23.1,
"aliases": [
"atkinson:6414"
],
"audit": {
"WARNING": [
{
"category": "missing tier 1 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 1 field `sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier1_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `dbxrefs`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `genetic_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `aab_iaa_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `other_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `data_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO8076DOPQ](/human-donors/PKBDO8076DOPQ/) is missing tier 3 field `related_donors`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO8076DOPQ/"
}
]
},
"award": {
"@id": "/awards/3-SRA-2023-1417-S-B/"
},
"bmi": 28.4,
"c_peptide": 0.16,
"cause_of_death": "Anoxia",
"center_donor_id": "SAMN15879467",
"collections": [
"nPOD"
],
"creation_timestamp": "2024-12-04T17:49:52.878084+00:00",
"derived_diabetes_status": "Diabetes",
"description": "Human donor SAMN15879467 in the nPOD database",
"diabetes_duration": "0.43",
"diabetes_status": [
"/phenotype-terms/MONDO_0005147/"
],
"diabetes_status_description": "Type 1 Diabetes",
"ethnicities": [
"African American"
],
"family_history_of_diabetes": "TRUE",
"family_history_of_diabetes_relationship": [
"brother",
"sister"
],
"gender": "Male",
"hba1c": 14,
"hla_typing": [
"A,01:01-23:01,NGS",
"B,07:02-08:01,NGS",
"C,07:01-07:02,NGS",
"DRB1,03:01-09:01,NGS",
"DQA1,05:01-03:03,NGS",
"DQB1,02:01-02:02,NGS",
"DPA1,01:03-01:04,NGS",
"DPB1,04:01-15:01,NGS"
],
"hospital_stay": 111,
"human_donor_identifiers": [
"nPOD_portal:6414"
],
"lab": {
"@id": "/labs/mark-atkinson/"
},
"living_donor": false,
"notes": "Cohort_ID:6414;-",
"other_tissues_available": [],
"pancreas_tissue_available": true,
"publication_identifiers": [
"PMID:24325575",
"PMID:22585677"
],
"release_timestamp": "2025-01-10T01:38:06.588262+00:00",
"rrid": "RRID:SAMN15879467",
"schema_version": "21",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from the nPOD portal",
"summary": "PKBDO8076DOPQ",
"t1d_stage": "Stage 3: one or more autoantibodies and diagnostic hyperglycemia or T1D diagnosis",
"taxa": "Homo sapiens",
"url": "https://portal.jdrfnpod.org/",
"uuid": "ccf46c84-df63-480e-9859-2bf9a4f21e51",
"virtual": false
}