PKBDO7906MFMG
PKBDO7906MFMG
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
29
Age group
18-39
BMI
24.5
Height (cm)
—
Weight (kg)
—
HbA1c %
5.6
C-Peptide (ng/ml)
9
Diabetes duration
—
AAB summary
GADA+
AAB count
1
Demographics
- Age (y)
- 29
- Age group
- 18-39
- Pediatric
- No
- Gender
- Male
- Genetic Sex
- Male
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (95%), African (2%), East-Asian (2%), Admixed-American (1%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- At-risk: single or transient autoantibody, normal glucose level
- HbA1c-derived diabetes status
- Normal
- Label vs HbA1c discordant
- No
- Tier 1 complete
- No
- Family history of diabetes
- FALSE
- Living donor
- No
- Cause of death
- Head Trauma
- Donation type
- Donation after brain death
- Hospital stay (h)
- 50
Autoantibodies
- Summary
- GADA+
- Any positive
- Yes
- Tested
- Yes
- Positive count
- 1
GADAPositive
119 unit/ml
1
IAANegative
0.004 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
0.007 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 24:02 | NGS |
| A | 2 | 24 | RT-PCR |
| B | 44 | 51 | RT-PCR |
| B | 44:02 | 51:01 | NGS |
| Bw | 4 | — | RT-PCR |
| Bw4 | 1 | 1 | RT-PCR |
| Bw6 | 0 | 0 | RT-PCR |
| C | 03:03 | 05:01 | NGS |
| C | 9 | 5 | RT-PCR |
| DPA1 | 01 | — | NGS |
| DQA | 03 | — | RT-PCR |
| DQA1 | 03:01 | 03:02 | NGS |
| DQB | 8 | 9 | RT-PCR |
| DQB1 | 03:02 | 03:03 | NGS |
| DR | 4 | 9 | RT-PCR |
| DR51 | 0 | — | RT-PCR |
| DR52 | 0 | — | RT-PCR |
| DR53 | 1 | — | RT-PCR |
| DRB1 | 04:01 | 09:01 | NGS |
| DRB3 | — | — | NGS |
| DRB4 | 01:03 | — | NGS |
| DRB5 | — | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, ATAC-seq, Function, Imaging, Morphology, CyTof, WGBS, Histology, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph, Peripheral_blood
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
RNAseqAccess dataset
ATAC-seqAccess dataset
FunctionAccess dataset
ImagingAccess dataset
MorphologyAccess dataset
CyTofAccess dataset
WGBSAccess dataset
Pancreas
histologyAccess dataset
imaging_mass_specAccess dataset
Spleen
Lymph
Flow_cytometryAccess dataset
histologyAccess dataset
Peripheral_blood
Flow_cytometryAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-003
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-003
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
