PKBDO7294OPLW
PKBDO7294OPLW
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
40
Age group
40-64
BMI
36.88
Height (cm)
—
Weight (kg)
—
HbA1c %
6.3
C-Peptide (ng/ml)
4.25
Diabetes duration
—
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 40
- Age group
- 40-64
- Pediatric
- No
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (89%), African (5%), Admixed-American (4%), East-Asian (2%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Prediabetes
- Label vs HbA1c discordant
- No
- Tier 1 complete
- No
- Family history of diabetes
- -
- Living donor
- No
- Cause of death
- Anoxia
- Donation type
- Donation after brain death
- Hospital stay (h)
- 119
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
5 unit/ml
IAANegative
-0.001 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.004 unit/ml
HLA typing
Status: X/X
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 03:01 | NGS |
| A | 2 | 3 | RT-PCR |
| B | 07:02 | 40:01 | NGS |
| B | 7 | 60 | RT-PCR |
| Bw4 | 0 | 0 | RT-PCR |
| Bw6 | 1 | 1 | RT-PCR |
| C | 03:04 | 07:02 | NGS |
| C | 10 | 07 | RT-PCR |
| DPA1 | 01:03 | 02:06 | NGS |
| DPB1 | 03:01 | 05:01 | NGS |
| DPB1 | 03:01 | 05:01 | RT-PCR |
| DQA1 | 01 | 01 | RT-PCR |
| DQA1 | 01:02 | — | NGS |
| DQB1 | 06:02 | 06:04 | NGS |
| DQB1 | 6 | 6 | RT-PCR |
| DR | 13 | 15 | RT-PCR |
| DR51 | 51 | 0 | RT-PCR |
| DR52 | 52 | 0 | RT-PCR |
| DR53 | 0 | 0 | RT-PCR |
| DRB1 | 13:02 | 15:01 | NGS |
| DRB3 | 03:01 | — | NGS |
| DRB4 | — | — | NGS |
| DRB5 | — | 01:01 | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, scRNAseq, Function, CyTof, WGBS, Histology, CODEX, imaging_mass_spec
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
RNAseqAccess dataset
scRNAseqAccess dataset
FunctionAccess dataset
CyTofAccess dataset
WGBSAccess dataset
Pancreas
Spleen
histologyAccess dataset
Lymph
histologyAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-074
- Pancreas tissue available
- Yes
- Other tissues
Publication data
External resources
PANC-DB:HPAP-074
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
