PKBDO7200ETXJ
{
"@context": "/terms/",
"@id": "/human-donors/PKBDO7200ETXJ/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"accession": "PKBDO7200ETXJ",
"age": 38,
"aliases": [
"macdonald:R437"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 2 field `ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 2 field `hospital_stay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 2 field `cause_of_death`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `dbxrefs`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `biological_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `diabetes_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `c_peptide`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_gada`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_gada_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_ia2`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_ia2_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_iaa`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_iaa_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_iaa_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_znt8`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_znt8_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `other_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `data_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO7200ETXJ](/human-donors/PKBDO7200ETXJ/) is missing tier 3 field `related_donors`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO7200ETXJ/"
}
]
},
"award": {
"@id": "/awards/5-SRA-2021-1149-S-B/"
},
"bmi": 38.6,
"center_donor_id": "SAMN26867010",
"collections": [
"ADI"
],
"creation_timestamp": "2024-12-03T23:51:00.788158+00:00",
"derived_diabetes_status": "Diabetes",
"description": "Human donor SAMN26867010 in the ADI database",
"diabetes_status": [
"/phenotype-terms/MONDO_0005147/"
],
"diabetes_status_description": "type 1 diabetes",
"donation_type": "Natural Death Donation",
"hba1c": 10,
"hla_typing": [
"A,3-11,.",
"B,8-8,.",
"C,.-.,.",
"DRB1,17-17,.",
"DR,52-.,.",
"DQB1,2-2,.",
"DQA1,5-5,.",
"DPB1,01:01-04:01,.",
"DPA1,1-2,.",
"Bw,6-6,.",
"Cw,7-7,."
],
"human_donor_identifiers": [
"HumanIslets:R437"
],
"lab": {
"@id": "/labs/patrick-macdonald/",
"title": "Patrick Macdonald, CBell"
},
"living_donor": false,
"notes": "Cohort ID:R437",
"other_tissues_available": [],
"pancreas_tissue_available": true,
"publication_identifiers": [
"PMID:26653569",
"PMID:39357523"
],
"release_timestamp": "2025-01-10T01:36:18.903203+00:00",
"rrid": "RRID:SAMN26867010",
"schema_version": "18",
"sex": "female",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from ADI",
"summary": "female /phenotype-terms/MONDO_0005147/",
"t1d_stage": "Stage 3: One or more autoantibodies and diagnostic hyperglycemia or T1D diagnosis",
"taxa": "Homo sapiens",
"url": "https://www.humanislets.com/",
"uuid": "f15b5409-357b-4404-8a2b-947626b82f99",
"virtual": false
}
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
