{
"@context": "/terms/",
"@id": "/human-donors/PKBDO6920YKFO/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"aab_gada": true,
"aab_ia2": false,
"aab_iaa": false,
"aab_znt8": false,
"accession": "PKBDO6920YKFO",
"age": 37,
"aliases": [
"atkinson:6281"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `dbxrefs`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `biological_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_gada_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_ia2_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_iaa_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_iaa_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_znt8_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `other_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `data_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO6920YKFO](/human-donors/PKBDO6920YKFO/) is missing tier 3 field `related_donors`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO6920YKFO/"
}
]
},
"award": {
"@id": "/awards/3-SRA-2023-1417-S-B/"
},
"bmi": 37.1,
"c_peptide": 0.05,
"cause_of_death": "Anoxia",
"center_donor_id": "SAMN15879335",
"collections": [
"nPOD"
],
"creation_timestamp": "2024-12-04T00:25:24.992967+00:00",
"derived_diabetes_status": "Diabetes",
"description": "Human donor SAMN15879335 in the nPOD database",
"diabetes_duration": "20",
"diabetes_status": [
"/phenotype-terms/MONDO_0005147/"
],
"diabetes_status_description": "type 1 diabetes",
"ethnicities": [
"White"
],
"hba1c": 7.6,
"hla_typing": [
"A,24:02-29:02,NGS",
"B,.-.,NGS",
"C,.-.,NGS",
"DRB1,03:01-07:01,NGS",
"DQA1,02:01-05:01,NGS",
"DQB1,02:01-02:02,NGS",
"DPA1,.-.,NGS",
"DPB1,.-.,NGS"
],
"hospital_stay": 102,
"human_donor_identifiers": [
"nPOD_portal:6281"
],
"lab": {
"@id": "/labs/mark-atkinson/",
"title": "Mark Atkinson, UFHealth"
},
"living_donor": false,
"notes": "Cohort_ID:6281;hypertension, hypothyroidism, dyslipidemia",
"other_tissues_available": [],
"pancreas_tissue_available": true,
"publication_identifiers": [
"PMID:24325575",
"PMID:22585677"
],
"release_timestamp": "2025-01-10T01:37:39.259584+00:00",
"rrid": "RRID:SAMN15879335",
"schema_version": "18",
"sex": "male",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from the nPOD portal",
"summary": "White male /phenotype-terms/MONDO_0005147/",
"t1d_stage": "Stage 3: One or more autoantibodies and diagnostic hyperglycemia or T1D diagnosis",
"taxa": "Homo sapiens",
"url": "https://portal.jdrfnpod.org/",
"uuid": "f8952f90-5cd4-4ee3-b305-440b4d54873e",
"virtual": false
}