PKBDO6422YEOG
PKBDO6422YEOG
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
24
Age group
18-39
BMI
32.2
Height (cm)
—
Weight (kg)
—
HbA1c %
5.4
C-Peptide (ng/ml)
6.73
Diabetes duration
—
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 24
- Age group
- 18-39
- Pediatric
- No
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- Hispanic
- Predicted genetic ancestry
- Admixed-American (100%)
- Dominant genetic ancestry
- Admixed-American
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Normal
- Label vs HbA1c discordant
- No
- Tier 1 complete
- No
- Family history of diabetes
- TRUE
- Family history relationship
- Father, Mother
- Living donor
- No
- Cause of death
- Anoxia
- Donation type
- Donation after brain death
- Hospital stay (h)
- 325
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
0.003 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.001 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 23 | 74 | RT-PCR |
| A | 23:01 | 74:01 | NGS |
| B | 35 | 44 | RT-PCR |
| B | 35:01 | 44:03 | NGS |
| Bw | 4 | 6 | RT-PCR |
| Bw4 | 1 | — | RT-PCR |
| Bw6 | 1 | — | RT-PCR |
| C | 02:10 | 16:01 | NGS |
| C | 2 | 16 | RT-PCR |
| DPA1 | 02:01 | 03:01 | NGS |
| DPB | 04:01 | 11:01 | RT-PCR |
| DPB1 | 04:01 | 11:01 | NGS |
| DQA | 01 | 02 | RT-PCR |
| DQA1 | 01:02 | 02:01 | NGS |
| DQB | 2 | 6 | RT-PCR |
| DQB1 | 02:02 | 06:02 | NGS |
| DR | 7 | 15 | RT-PCR |
| DR51 | 0 | — | RT-PCR |
| DR52 | 0 | — | RT-PCR |
| DR53 | — | 1 | RT-PCR |
| DRB1 | 07:01 | 15:03 | NGS |
| DRB3 | — | — | NGS |
| DRB4 | 01:01 | — | NGS |
| DRB5 | — | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, ATAC-seq, Function, Imaging, Morphology, CyTof, WGBS, Histology, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
RNAseqAccess dataset
ATAC-seqAccess dataset
FunctionAccess dataset
ImagingAccess dataset
MorphologyAccess dataset
CyTofAccess dataset
WGBSAccess dataset
Pancreas
histologyAccess dataset
imaging_mass_specAccess dataset
Spleen
Lymph
histologyAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-004
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-004
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
