PKBDO6262PNSI
PKBDO6262PNSI
released
Clinical summary
Diabetes status
Type 2 Diabetes
Age (y)
50
Age group
40-64
BMI
30.49
Height (cm)
—
Weight (kg)
—
HbA1c %
5.8
C-Peptide (ng/ml)
3.11
Diabetes duration
0.67
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 50
- Age group
- 40-64
- Pediatric
- No
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (94%), East-Asian (3%), African (1%), Admixed-American (1%), South-Asian (1%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Prediabetes
- Label vs HbA1c discordant
- No
- Tier 1 complete
- Yes
- Family history of diabetes
- -
- Living donor
- No
- Cause of death
- Cerebrovascular/Stroke
- Donation type
- Donation after circulatory death
- Hospital stay (h)
- 446
- Medication
- Metformin
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
0.002 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.001 unit/ml
HLA typing
Status: X/X
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 02:05 | NGS |
| A | 2 | 2 | RT-PCR |
| B | 35 | 50 | RT-PCR |
| B | 35:01 | 50:01 | NGS |
| Bw4 | 0 | 0 | RT-PCR |
| Bw6 | 1 | 1 | RT-PCR |
| C | 04 | 06 | RT-PCR |
| C | 04:01 | 06:02 | NGS |
| DPA1 | 01:03 | 02:01 | NGS |
| DPB1 | 09:01 | 23:01 | NGS |
| DPB1 | 09:01 | 23:01 | RT-PCR |
| DQA1 | 02 | 05 | RT-PCR |
| DQA1 | 02:01 | 05:05 | NGS |
| DQB1 | 02:02 | 03:01 | NGS |
| DQB1 | 2 | 7 | RT-PCR |
| DR | 7 | 13 | RT-PCR |
| DR51 | 0 | 0 | RT-PCR |
| DR52 | 52 | 0 | RT-PCR |
| DR53 | 0 | 0 | RT-PCR |
| DRB1 | 13:05 | 07:01 | NGS |
| DRB3 | 02:02 | — | NGS |
| DRB4 | — | 01:01 | NGS |
| DRB5 | — | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, scRNAseq, snATACseq, Function, Imaging, CyTof, Histology, imaging_mass_spec
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
RNAseqAccess dataset
scRNAseqAccess dataset
snATACseqAccess dataset
FunctionAccess dataset
ImagingAccess dataset
CyTofAccess dataset
Pancreas
histologyAccess dataset
imaging_mass_specAccess dataset
Spleen
histologyAccess dataset
Lymph
histologyAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-057
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-057
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
