PKBDO5858GCUP
PKBDO5858GCUP
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
3
Age group
0-12
BMI
17.6
Height (cm)
—
Weight (kg)
—
HbA1c %
5.5
C-Peptide (ng/ml)
1.56
Diabetes duration
—
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 3
- Age group
- 0-12
- Pediatric
- Yes
- Gender
- Male
- Genetic Sex
- Male
- Sex discordant
- No
- Ethnicity
- African American
- Predicted genetic ancestry
- African (56%), Admixed-American (17%), European (16%), South-Asian (8%), East-Asian (3%)
- Dominant genetic ancestry
- African
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Normal
- Label vs HbA1c discordant
- No
- Tier 1 complete
- No
- Family history of diabetes
- TRUE
- Family history relationship
- Paternal_grandmother
- Living donor
- No
- Cause of death
- Anoxia
- Donation type
- Donation after brain death
- Hospital stay (h)
- 87
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
0 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
0.001 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 11:01 | NGS |
| A | 2 | 11 | RT-PCR |
| B | 51 | — | RT-PCR |
| B | 51:01 | — | NGS |
| Bw4 | 1 | — | RT-PCR |
| Bw6 | 0 | — | RT-PCR |
| C | 15 | 16 | RT-PCR |
| C | 15:02 | 16:01 | NGS |
| DPA1 | 01:03 | 02:01 | NGS |
| DPB | 01:01 | 04:01 | RT-PCR |
| DPB1 | 01:01 | 04:01 | NGS |
| DQA | 01 | 02 | RT-PCR |
| DQA1 | 01:04 | 02:01 | NGS |
| DQB | 02 | 05 | RT-PCR |
| DQB1 | 02:02 | 05:03 | NGS |
| DR | 7 | 14 | RT-PCR |
| DR51 | 0 | — | RT-PCR |
| DR52 | 1 | — | RT-PCR |
| DR53 | 1 | — | RT-PCR |
| DRB1 | 14:54 | 07:01 | NGS |
| DRB3 | 02:02 | — | NGS |
| DRB4 | — | 01:03 | NGS |
| DRB5 | — | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, Function, Morphology, CyTof, Histology, CODEX, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
Pancreas
Spleen
Lymph
histologyAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-011
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-011
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
