PKBDO4563KUHK
{
"@context": "/terms/",
"@id": "/human-donors/PKBDO4563KUHK/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"accession": "PKBDO4563KUHK",
"age": 21,
"aliases": [
"prodo:HP18306-01"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 2 field `rrid`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 2 field `diabetes_status_hba1c`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 2 field `hospital_stay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `dbxrefs`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `biological_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `diabetes_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `c_peptide`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_gada`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_ia2`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_znt8`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `hla_typing`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `publication_identifiers`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO4563KUHK](/human-donors/PKBDO4563KUHK/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO4563KUHK/"
}
]
},
"award": {
"@id": "/awards/PSEUDO2/"
},
"bmi": 27.62,
"cause_of_death": "Head Trauma",
"center_donor_id": "HP18306-01",
"collections": [
"Prodo"
],
"creation_timestamp": "2024-12-04T18:33:59.745369+00:00",
"data_available": [
{
"dataset": "scRNAseq",
"dataset_link": "https://www.ncbi.nlm.nih.gov/geo/",
"dataset_tissue": "Islet"
}
],
"description": "Human donor HP18306-01 in the Prodo Laboratories database",
"diabetes_status": [],
"diabetes_status_description": "non-diabetic",
"ethnicities": [
"Hispanic"
],
"hba1c": 5.4,
"human_donor_identifiers": [
"Prodo:HP18306-01"
],
"lab": {
"@id": "/labs/prodo-laboratories/",
"title": "Prodo Laboratories, PRODO"
},
"living_donor": false,
"notes": "Cohort_ID:HP18306-01",
"other_tissues_available": [],
"pancreas_tissue_available": false,
"release_timestamp": "2025-01-10T01:42:49.575357+00:00",
"schema_version": "16",
"sex": "male",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from Prodo",
"summary": "Hispanic male",
"taxa": "Homo sapiens",
"url": "https://prodolabs.com/",
"uuid": "d8ddfcfe-b4cc-4164-b4a6-adc7ab8257c3",
"virtual": false
}
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies