PKBDO4211NVEU

released

PKBDO4211NVEU

released
RRID RRID:SAMN30486794Program Donor ID SAMN30486794

Clinical summary

Diabetes status
Type 2 Diabetes
Age (y)
47
Age group
40-64
BMI
30.96
Height (cm)
—
Weight (kg)
—
HbA1c %
5.4
C-Peptide (ng/ml)
7.2
Diabetes duration
10
AAB summary
none positive
AAB count
0

Demographics

Age (y)
47
Age group
40-64
Pediatric
No
Gender
Male
Genetic Sex
Male
Sex discordant
No
Ethnicity
White
Predicted genetic ancestry
European (92%), Admixed-American (4%), European (2%), South-Asian (2%)
Dominant genetic ancestry
European

Additional clinical

Diabetes (ontology)
T1D stage
No sufficient information to derive
HbA1c-derived diabetes status
Normal
Label vs HbA1c discordant
Yes
Tier 1 complete
Yes
Family history of diabetes
TRUE
Family history relationship
Mother
Living donor
No
Cause of death
Head Trauma
Donation type
Donation after brain death
Hospital stay (h)
122
Medication
Metformin

Autoantibodies

Summary
none positive
Any positive
No
Tested
Yes
Positive count
0
GADANegative
0 unit/ml
IAANegative
-0.004 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.008 unit/ml

HLA typing

Status: DR4/X

LocusAllele 1Allele 2Method
A332RT-PCR
B1835RT-PCR
Bw400RT-PCR
Bw611RT-PCR
C0407RT-PCR
DPB102:0116:01RT-PCR
DQA10203RT-PCR
DQB189RT-PCR
DR47RT-PCR
DR510—RT-PCR
DR520—RT-PCR
DR5353—RT-PCR

Data available

Datasets
Genotyping, HLA_typing, scRNAseq, Function, CyTof, Histology
Tissues
unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset
HLA_typingAccess dataset

Pancreas

Spleen

Lymph

Supplementary

HPAP
Identifiers
PANC-DB:HPAP-124
Pancreas tissue available
Yes
Publication identifiers
PMID:31127054, PMID:36206763
Description
Human pancreas donor SAMN30486794 in the HPAP database
External resources
PANC-DB:HPAP-124

Attribution

HPAP collection
Data Library