PKBDO3778RPBZ

released

PKBDO3778RPBZ

released
RRID RRID:SAMN19842592Program Donor ID SAMN19842592

Clinical summary

Diabetes status
Control Without Diabetes
Age (y)
45
Age group
40-64
BMI
38.41
Height (cm)
—
Weight (kg)
—
HbA1c %
6.3
C-Peptide (ng/ml)
7.27
Diabetes duration
—
AAB summary
none positive
AAB count
0

Demographics

Age (y)
45
Age group
40-64
Pediatric
No
Gender
Female
Genetic Sex
Female
Sex discordant
No
Ethnicity
White
Predicted genetic ancestry
European (100%)
Dominant genetic ancestry
European

Additional clinical

Diabetes (ontology)
No ontology term
T1D stage
No sufficient information to derive
HbA1c-derived diabetes status
Prediabetes
Label vs HbA1c discordant
No
Tier 1 complete
No
Family history of diabetes
TRUE
Family history relationship
Mother, Father, Maternal_grandfather, Paternal_grandfather
Living donor
No
Cause of death
Anoxia
Donation type
Donation after brain death
Hospital stay (h)
79

Autoantibodies

Summary
none positive
Any positive
No
Tested
Yes
Positive count
0
GADANegative
0 unit/ml
IAANegative
0 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.012 unit/ml

HLA typing

Status: DR3/X

LocusAllele 1Allele 2Method
A11RT-PCR
B857RT-PCR
Bw411RT-PCR
Bw611RT-PCR
C0607RT-PCR
DPB104:0113:01RT-PCR
DQA10105RT-PCR
DQB125RT-PCR
DR1017RT-PCR
DR5100RT-PCR
DR523:010RT-PCR
DR5300RT-PCR

Data available

Datasets
Genotyping, HLA_typing, RNAseq, scRNAseq, ATAC-seq, snATACseq, Function, Imaging, CyTof, WGBS, Histology, imaging_mass_spec
Tissues
unspecified, Islet, Pancreas, Spleen, Lymph

Genetics

GenotypingAccess dataset
HLA_typingAccess dataset

Pancreas

imaging_mass_specAccess dataset

Spleen

Lymph

Supplementary

HPAP
Identifiers
PANC-DB:HPAP-063
Pancreas tissue available
Yes
Publication data
Publication identifiers
PMID:31127054, PMID:36206763
Description
Human pancreas donor SAMN19842592 in the HPAP database
External resources
PANC-DB:HPAP-063

Attribution

HPAP collection
Data Library